RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
SKP2-207ENST00000513263 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
SKP2-207ENST00000513263 REV3LO60673 3130 aa12.84□□□□□ -0.35
SKP2-207ENST00000513263 A6NJR5 290 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 MYL3P08590 195 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 ACRP10323 421 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 SDSP20132 328 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 SNAP25P60880 206 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SKP2-207ENST00000513263 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 SAMD3Q8N6K7 520 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
SKP2-207ENST00000513263 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
SKP2-207ENST00000513263 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 IWS1Q96ST2 819 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 THEGQ9P2T0 379 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 TET1Q8NFU7 2136 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
SKP2-207ENST00000513263 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 BAIAP3O94812 1187 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 PARP1P09874 1014 aaKnown RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 TXNP10599 105 aaKnown RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 CDC37Q16543 378 aaPredicted RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 TRPV6Q9H1D0 765 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 WNT8AQ9H1J5 351 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 MAP3K20Q9NYL2 800 aaKnown RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 MRPL11Q9Y3B7 192 aaKnown RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 PRRC2BQ5JSZ5 2229 aaKnown RBP12.82□□□□□ -0.36
SKP2-207ENST00000513263 NEDD4P46934 1319 aa12.82□□□□□ -0.36
SKP2-207ENST00000513263 MICAL3Q7RTP6 2002 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 SIP14410 1827 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 KIF28PB7ZC32 967 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
SKP2-207ENST00000513263 CCL23P55773 120 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 PSMC6P62333 389 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 NUCB1Q02818 461 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 STXBP2Q15833 593 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 USH1GQ495M9 461 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 KCNV1Q6PIU1 500 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
SKP2-207ENST00000513263 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
SKP2-207ENST00000513263 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 GTPBP6O43824 516 aaPredicted RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 DHX16O60231 1041 aaKnown RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 KDM4AO75164 1064 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 GH1P01241 217 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 PBX2P40425 430 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 TRDNQ13061 729 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 CWC27Q6UX04 472 aaKnown RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 PRDM12Q9H4Q4 367 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 CXXC1Q9P0U4 656 aaPredicted RBP12.8□□□□□ -0.36
SKP2-207ENST00000513263 BRWD1Q9NSI6 2320 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 UMODL1Q5DID0 1318 aa12.8□□□□□ -0.36
SKP2-207ENST00000513263 EFCAB14O75071 495 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
SKP2-207ENST00000513263 KCNJ6P48051 423 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 DGKDQ16760 1214 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 NBPF20Q3BBV1 942 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 TMEM67Q5HYA8 995 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
SKP2-207ENST00000513263 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 PURBQ96QR8 312 aaKnown RBP12.79□□□□□ -0.36
SKP2-207ENST00000513263 RMDN3Q96TC7 470 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 AMNQ9BXJ7 453 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
SKP2-207ENST00000513263 GRXCR1A8MXD5 290 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
SKP2-207ENST00000513263 MMP3P08254 477 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 IGFBP4P22692 258 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
SKP2-207ENST00000513263 GHRHRQ02643 423 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
SKP2-207ENST00000513263 ARHGEF16Q5VV41 709 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
SKP2-207ENST00000513263 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 SCLYQ96I15 445 aa12.78□□□□□ -0.36
SKP2-207ENST00000513263 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms