RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 GLT1D1Q96MS3 346 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 UPF3AQ9H1J1 476 aaKnown RBP14.84□□□□□ -0.03
SDHA-215ENST00000512962 CERS4Q9HA82 394 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 MCM9Q9NXL9 1143 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 FCF1Q9Y324 198 aaKnown RBP14.84□□□□□ -0.03
SDHA-215ENST00000512962 ASTN1O14525 1302 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 GRIN2DO15399 1336 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 ELP1O95163 1332 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 MUC6Q6W4X9 2439 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 LCTP09848 1927 aa14.84□□□□□ -0.03
SDHA-215ENST00000512962 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 VWA5AO00534 786 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 ERC2O15083 957 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 WDR46O15213 610 aaKnown RBP14.83□□□□□ -0.04
SDHA-215ENST00000512962 DUSP11O75319 330 aaKnown RBP14.83□□□□□ -0.04
SDHA-215ENST00000512962 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
SDHA-215ENST00000512962 CCL23P55773 120 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 BEX3Q00994 111 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 ICA1Q05084 483 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 ZBTB33Q86T24 672 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 PHTF2Q8N3S3 785 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 LCORLQ8N3X6 602 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 KATNBL1Q9H079 304 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 FAM184BQ9ULE4 1060 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 HCN4Q9Y3Q4 1203 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 MTCH2Q9Y6C9 303 aa14.83□□□□□ -0.04
SDHA-215ENST00000512962 A0A0U1RQG5 324 aaPredicted RBP14.82□□□□□ -0.04
SDHA-215ENST00000512962 BCAR3O75815 825 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 TRIM27P14373 513 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 STAT3P40763 770 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 CCDC144BQ3MJ40 725 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 TMEM31Q5JXX7 168 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 ALYREFQ86V81 257 aaKnown RBP14.82□□□□□ -0.04
SDHA-215ENST00000512962 RNF135Q8IUD6 432 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 DEPDC4Q8N2C3 294 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 BAP1Q92560 729 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
SDHA-215ENST00000512962 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
SDHA-215ENST00000512962 PPP1R9AQ9ULJ8 1098 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 DDX49Q9Y6V7 483 aaKnown RBP14.82□□□□□ -0.04
SDHA-215ENST00000512962 MROH7Q68CQ1 1323 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 TANC1Q9C0D5 1861 aa14.82□□□□□ -0.04
SDHA-215ENST00000512962 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
SDHA-215ENST00000512962 PRKAB2O43741 272 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 FGBP02675 491 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 EEF2P13639 858 aaKnown RBP14.81□□□□□ -0.04
SDHA-215ENST00000512962 GJA9P57773 515 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 FAM83BQ5T0W9 1011 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 MAMDC4Q6UXC1 1216 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 SLC43A3Q8NBI5 491 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 SSH3Q8TE77 659 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 SCLYQ96I15 445 aa14.81□□□□□ -0.04
SDHA-215ENST00000512962 NOC4LQ9BVI4 516 aaKnown RBP14.81□□□□□ -0.04
SDHA-215ENST00000512962 MYH4Q9Y623 1939 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 TCRBV5S4A2TA0A5A2 114 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 IGSF3O75054 1194 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
SDHA-215ENST00000512962 CHGBP05060 677 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 CA3P07451 260 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 PDE6AP16499 860 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 OS9Q13438 667 aaPredicted RBP14.8□□□□□ -0.04
SDHA-215ENST00000512962 ACVR2BQ13705 512 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 LINC01559Q495D7 138 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 TMEM63BQ5T3F8 832 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 VTI1AQ96AJ9 217 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 TRPV6Q9H1D0 765 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 HIPK3Q9H422 1215 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 ARHGEF10LQ9HCE6 1279 aa14.8□□□□□ -0.04
SDHA-215ENST00000512962 TTLL4Q14679 1199 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 GNASQ5JWF2 1037 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 CERS3Q8IU89 383 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 PIEZO1Q92508 2521 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 BRWD1Q9NSI6 2320 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 PCDHA11Q9Y5I1 949 aa14.79□□□□□ -0.04
SDHA-215ENST00000512962 MYH7P12883 1935 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 B4GALT4O60513 344 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 POU3F3P20264 500 aaPredicted RBP14.78□□□□□ -0.04
SDHA-215ENST00000512962 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
SDHA-215ENST00000512962 ZNF511Q8NB15 262 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 PCSK9Q8NBP7 692 aaKnown RBP14.78□□□□□ -0.04
SDHA-215ENST00000512962 PLPP7Q8NBV4 271 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 ARHGAP45Q92619 1136 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 FOXJ1Q92949 421 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 AGBL1Q96MI9 1066 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 ARMT1Q9H993 441 aa14.78□□□□□ -0.04
SDHA-215ENST00000512962 TET1Q8NFU7 2136 aa14.77□□□□□ -0.04
SDHA-215ENST00000512962 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.05
SDHA-215ENST00000512962 PSMC6P62333 389 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 NKX3-2P78367 333 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 NCOA4Q13772 614 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 C4orf48Q5BLP8 95 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 ARMCX2Q7L311 632 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 BPHLQ86WA6 291 aaPredicted RBP14.77□□□□□ -0.05
SDHA-215ENST00000512962 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
SDHA-215ENST00000512962 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms