RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 SLC1A4P43007 532 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 CPT1AP50416 773 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-205ENST00000512925 WDR5P61964 334 aaKnown RBP12.34□□□□□ -0.43
PFDN1-205ENST00000512925 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-205ENST00000512925 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 FAM47CQ5HY64 1035 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 RCSD1Q6JBY9 416 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 RETREG2Q8NC44 543 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-205ENST00000512925 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-205ENST00000512925 ZNF287Q9HBT7 754 aa12.34□□□□□ -0.43
PFDN1-205ENST00000512925 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 SCN10AQ9Y5Y9 1956 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 A6NJR5 290 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 GPAA1O43292 621 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 HMMRO75330 724 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 TSPY3P0CV98 308 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 TSPY8P0CW00 308 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 IL9P15248 144 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 MRE11P49959 708 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 ERVK-21P61565 698 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 DEFB103AP81534 67 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 TFAP4Q01664 338 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-205ENST00000512925 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 OR6J1Q8NGC5 347 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 APPBP2Q92624 585 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 COPS5Q92905 334 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-205ENST00000512925 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 LCTP09848 1927 aa12.33□□□□□ -0.44
PFDN1-205ENST00000512925 LOC102724159A0A0B4J2E5 919 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 M0R2C6 588 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 ICAM1P05362 532 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 KCNJ6P48051 423 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 TDO2P48775 406 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 NHLH1Q02575 133 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 BFSP2Q13515 415 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 PWP2Q15269 919 aaKnown RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 ADD3Q9UEY8 706 aaKnown RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
PFDN1-205ENST00000512925 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-205ENST00000512925 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 NFIBO00712 420 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
PFDN1-205ENST00000512925 KPNA6O60684 536 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 GJB5O95377 273 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 SEC24BO95487 1268 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 CXCL10P02778 98 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 MS4A1P11836 297 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 GNAT2P19087 354 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 KCNA5P22460 613 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 EDNRBP24530 442 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
PFDN1-205ENST00000512925 RAD9AQ99638 391 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 RANBP17Q9H2T7 1088 aaKnown RBP12.31□□□□□ -0.44
PFDN1-205ENST00000512925 MTUS1Q9ULD2 1270 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 MYH7P12883 1935 aa12.31□□□□□ -0.44
PFDN1-205ENST00000512925 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 NMT2O60551 498 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 NBNO60934 754 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 ARIH2O95376 493 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 APPP05067 770 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 ALADP13716 330 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 NOVP48745 357 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 PDE4BQ07343 736 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 RBL2Q08999 1139 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 PTGISQ16647 500 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 GDF6Q6KF10 455 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 STX8Q9UNK0 236 aa12.3□□□□□ -0.44
PFDN1-205ENST00000512925 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
PFDN1-205ENST00000512925 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms