RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 MYL3P08590 195 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 CCL23P55773 120 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 TTLL4Q14679 1199 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 QRICH1Q2TAL8 776 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 WNT8AQ9H1J5 351 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 MYH6P13533 1939 aa17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 PDE4AP27815 886 aa17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 PBX2P40425 430 aa17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 FBXO11Q86XK2 927 aa17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 TRMT13Q9NUP7 481 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 MRPL11Q9Y3B7 192 aaKnown RBP17.16■□□□□ 0.34
CCHCR1-229ENST00000512418 GRXCR1A8MXD5 290 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 ARIH2O95376 493 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 RAB30Q15771 203 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 NFRKBQ6P4R8 1299 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 RPUSD2Q8IZ73 545 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 SYTL5Q8TDW5 730 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 TBC1D5Q92609 795 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 COPS5Q92905 334 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 COL25A1Q9BXS0 654 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
CCHCR1-229ENST00000512418 PFKMP08237 780 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 CYP2C9P11712 490 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 TRDNQ13061 729 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 SEC23AQ15436 765 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 STXBP2Q15833 593 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 NBPF20Q3BBV1 942 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 CCDC62Q6P9F0 684 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 SCLYQ96I15 445 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 RMDN3Q96TC7 470 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 AMNQ9BXJ7 453 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 MSRAQ9UJ68 235 aa17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
CCHCR1-229ENST00000512418 PTPN11Q06124 597 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-229ENST00000512418 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
CCHCR1-229ENST00000512418 CHD9Q3L8U1 2897 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 KIAA1217Q5T5P2 1943 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 PITPNM1O00562 1244 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 GH1P01241 217 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 ARHGEF16Q5VV41 709 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 SEPT14Q6ZU15 432 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 MTMR8Q96EF0 704 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 GAS2L1Q99501 681 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 SLC4A7Q9Y6M7 1214 aa17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-229ENST00000512418 ZBTB5O15062 677 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 CFBP00751 764 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 MMP3P08254 477 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 EIF2AK2P19525 551 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 HSD17B4P51659 736 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 GHRHRQ02643 423 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 LY6KQ17RY6 165 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 VWCEQ96DN2 955 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 PXMP2Q9NR77 195 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 GBF1Q92538 1859 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 TANC1Q9C0D5 1861 aa17.11■□□□□ 0.33
CCHCR1-229ENST00000512418 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 ZBBXA8MT70 800 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 OPLAHO14841 1288 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 CYP21A2P08686 494 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 CHMLP26374 656 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 RFC2P35250 354 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 BFSP2Q13515 415 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 RALYLQ86SE5 291 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 NKX2-4Q9H2Z4 354 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 PRDM12Q9H4Q4 367 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 SLC28A3Q9HAS3 691 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 NOD1Q9Y239 953 aa17.1■□□□□ 0.33
CCHCR1-229ENST00000512418 ERICH2A1L162 156 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 IFIT3O14879 490 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 PPP1R11O60927 126 aaPredicted RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 NR3C2P08235 984 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 ACTN1P12814 892 aa17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-229ENST00000512418 PTH1RQ03431 593 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms