RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MSL3Q8N5Y2 521 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 SLC9A7Q96T83 725 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 ADAMTS5Q9UNA0 930 aa12.2□□□□□ -0.46
PDLIM5-217ENST00000512274 NID2Q14112 1375 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 LCHNA4D1U4 455 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 GRXCR2A6NFK2 248 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 WDR46O15213 610 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ACTN1P12814 892 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 TRDNQ13061 729 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 KRT23Q9C075 422 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ABHD16BQ9H3Z7 469 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ZNF214Q9UL59 606 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 RIPK3Q9Y572 518 aa12.19□□□□□ -0.46
PDLIM5-217ENST00000512274 ASTN1O14525 1302 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 BAZ2AQ9UIF9 1905 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 ORC4O43929 436 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 PFKMP08237 780 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 ICA1Q05084 483 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 GABPAQ06546 454 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 IER5LQ5T953 404 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 RALYLQ86SE5 291 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 SGMS1Q86VZ5 419 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 MFSD14AQ96MC6 490 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 SLKQ9H2G2 1235 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 DCP1AQ9NPI6 582 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 FAM86C1Q9NVL1 165 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
PDLIM5-217ENST00000512274 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 GFRA3O60609 400 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 PFKFB2O60825 505 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 CABYRO75952 493 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 CYP2D6P10635 497 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 COPB2P35606 906 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 LIFRP42702 1097 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 TDO2P48775 406 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 FOXK2Q01167 660 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 PPARAQ07869 468 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 ME3Q16798 604 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 Q6ZUG5 572 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 REPS2Q8NFH8 660 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 PHOSPHO2Q8TCD6 241 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 PPP1R13LQ8WUF5 828 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 DYNLL2Q96FJ2 89 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 TRMT13Q9NUP7 481 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 LMCD1Q9NZU5 365 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
PDLIM5-217ENST00000512274 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 APPP05067 770 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 AKR1B1P15121 316 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 ANTXR2P58335 489 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 FGD4Q96M96 766 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 ZBED2Q9BTP6 218 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 SUGCTQ9HAC7 445 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 SIP14410 1827 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
PDLIM5-217ENST00000512274 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 RBAK-RBAKDNI3L0D1 243 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 ZEB2O60315 1214 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 BRD1O95696 1058 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 CPA1P15085 419 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 PDCP20941 246 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 PTMSP20962 102 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 PTPN5P54829 565 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 ST3GAL1Q11201 340 aa12.15□□□□□ -0.46
PDLIM5-217ENST00000512274 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms