RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 WDR63Q8IWG1 891 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 LSMEM1Q8N8F7 131 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZNF75CPQ92670 426 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 GJA10Q969M2 543 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PURBQ96QR8 312 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC39A3Q9BRY0 314 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TEX13AQ9BXU3 409 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 NLRC4Q9NPP4 1024 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 GIMAP2Q9UG22 337 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 HERC5Q9UII4 1024 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 PTCH2Q9Y6C5 1203 aa5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 V9GYY5 206 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-208ENST00000511955 TJP1Q07157 1748 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 CNTNAP4Q9C0A0 1308 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 PLOD3O60568 738 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 PYGLP06737 847 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 DESP17661 470 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 HOXD12P35452 270 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 ASIC2Q16515 512 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 SHROOM1Q2M3G4 852 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 METTL24Q5JXM2 366 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 VPS53Q5VIR6 699 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 LRCH2Q5VUJ6 765 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 SPOCD1Q6ZMY3 1216 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 TTLL7Q6ZT98 887 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAM47EQ6ZV65 393 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 NKAPQ8N5F7 415 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZNF454Q8N9F8 522 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 NAXEQ8NCW5 288 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 RASGRP4Q8TDF6 673 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 ASIC4Q96FT7 647 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 CEP95Q96GE4 821 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 KATNAL1Q9BW62 490 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 IQCGQ9H095 443 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 DEF6Q9H4E7 631 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 PHAXQ9H814 394 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 IRAK4Q9NWZ3 460 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 PFDN2Q9UHV9 154 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 BLOC1S6Q9UL45 172 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 COL15A1P39059 1388 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 RGPD3A6NKT7 1758 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 RGPD4Q7Z3J3 1758 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 MYH14Q7Z406 1995 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 TAF1LQ8IZX4 1826 aa5.67□□□□□ -1.5
TRAPPC11-208ENST00000511955 A0A087X0B3 334 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAM155AB1AL88 458 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 C9IYK1 514 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 GPTP24298 496 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SEPHS1P49903 392 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NLRP12P59046 1061 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MOGSQ13724 837 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 TTC31Q49AM3 519 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MEI1Q5TIA1 1274 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAAH2Q6GMR7 532 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 LRP10Q7Z4F1 713 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 RNF180Q86T96 592 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 PASD1Q8IV76 773 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 ANKRD18AQ8IVF6 992 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NIM1KQ8IY84 436 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 CCT6BQ92526 530 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MFSD3Q96ES6 412 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MOGAT1Q96PD6 335 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SPON1Q9HCB6 807 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NCOA5Q9HCD5 579 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 EXOC1Q9NV70 894 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 FNIP2Q9P278 1114 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 KIAA1024Q9UPX6 916 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 C2CD2Q9Y426 696 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 DDX49Q9Y6V7 483 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 KDM3BQ7LBC6 1761 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 UBR2Q8IWV8 1755 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SOS1Q07889 1333 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZNF521Q96K83 1311 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SFI1A8K8P3 1242 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 GABBR2O75899 941 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 MMP10P09238 476 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SOX5P35711 763 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 CCT5P48643 541 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 KRT83P78385 493 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLFN5Q08AF3 891 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NSUN2Q08J23 767 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 HLFQ16534 295 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC45A4Q5BKX6 768 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 IGF2-ASQ6U949 168 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 COPS6Q7L5N1 327 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NLRP14Q86W24 1093 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 IQCA1Q86XH1 822 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 CEP57L1Q8IYX8 460 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 DZIP1LQ8IYY4 767 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 PNMA1Q8ND90 353 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 BICD2Q8TD16 824 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 XAGE3Q8WTP9 111 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 RBM18Q96H35 190 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 SEC16BQ96JE7 1060 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 NEK1Q96PY6 1258 aa5.66□□□□□ -1.5
TRAPPC11-208ENST00000511955 DESI2Q9BSY9 194 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms