RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
DDX41-212ENST00000511040 PXMP2Q9NR77 195 aa16.14■□□□□ 0.17
DDX41-212ENST00000511040 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 B4DLN1 442 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 BEX3Q00994 111 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 GHRHRQ02643 423 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 TOB2Q14106 344 aaPredicted RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 KCNA10Q16322 511 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 IQSEC1Q6DN90 963 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 AGXT2Q9BYV1 514 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 WDR11Q9BZH6 1224 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 MAF1Q9H063 256 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 UPF3AQ9H1J1 476 aaKnown RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
DDX41-212ENST00000511040 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
DDX41-212ENST00000511040 CTAGE5O15320 804 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 PPFIA3O75145 1194 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
DDX41-212ENST00000511040 GJA9P57773 515 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
DDX41-212ENST00000511040 GNASQ5JWF2 1037 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 USP17L6PQ6QN14 398 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 SEPT14Q6ZU15 432 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 SPC25Q9HBM1 224 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
DDX41-212ENST00000511040 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
DDX41-212ENST00000511040 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
DDX41-212ENST00000511040 A0A1W2PQ45 241 aaPredicted RBP16.11■□□□□ 0.17
DDX41-212ENST00000511040 A0A1W2PQY0 241 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 RBM47A0AV96 593 aaKnown RBP16.11■□□□□ 0.17
DDX41-212ENST00000511040 NR3C2P08235 984 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 PDIA3P30101 505 aaKnown RBP16.11■□□□□ 0.17
DDX41-212ENST00000511040 ACLYP53396 1101 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 RCAN1P53805 252 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
DDX41-212ENST00000511040 SMARCC2Q8TAQ2 1214 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 COPS5Q92905 334 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 CUL5Q93034 780 aa16.11■□□□□ 0.17
DDX41-212ENST00000511040 MAP3K20Q9NYL2 800 aaKnown RBP16.11■□□□□ 0.17
DDX41-212ENST00000511040 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 ARIH2O95376 493 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 SYN1P17600 705 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 RTP1P59025 263 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 STK3Q13188 491 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 PPP2R5BQ15173 497 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 STXBP2Q15833 593 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
DDX41-212ENST00000511040 UBE2SQ16763 222 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 SLC39A5Q6ZMH5 540 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 SCFD2Q8WU76 684 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 TSEN34Q9BSV6 310 aaKnown RBP16.1■□□□□ 0.17
DDX41-212ENST00000511040 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 ATP11BQ9Y2G3 1177 aa16.1■□□□□ 0.17
DDX41-212ENST00000511040 MEIS2O14770 477 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 ASGR1P07306 291 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
DDX41-212ENST00000511040 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
DDX41-212ENST00000511040 NAPAP54920 295 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 EVCP57679 992 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 ANAPC15P60006 121 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 PGM5Q15124 567 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 TRIM60Q495X7 471 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 TYW1BQ6NUM6 668 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 OR6J1Q8NGC5 347 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 PHKBQ93100 1093 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 NID2Q14112 1375 aa16.09■□□□□ 0.17
DDX41-212ENST00000511040 STXBP3O00186 592 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
DDX41-212ENST00000511040 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
DDX41-212ENST00000511040 CCND2P30279 289 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 TTLL4Q14679 1199 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
DDX41-212ENST00000511040 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 STARD7Q9NQZ5 370 aa16.08■□□□□ 0.16
DDX41-212ENST00000511040 MOXD2PA6NHM9 499 aa16.07■□□□□ 0.16
DDX41-212ENST00000511040 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
DDX41-212ENST00000511040 SORBS3O60504 671 aa16.07■□□□□ 0.16
DDX41-212ENST00000511040 NKX3-2P78367 333 aa16.07■□□□□ 0.16
DDX41-212ENST00000511040 NTRK3Q16288 839 aa16.07■□□□□ 0.16
DDX41-212ENST00000511040 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms