RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OSBPL9Q96SU4 736 aa16.43■□□□□ 0.22
USP38-202ENST00000510377 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 HSPA1LP34931 641 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 ADCY7P51828 1080 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 SYCP3Q8IZU3 236 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 FAM133AQ8N9E0 248 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 PSD3Q9NYI0 1048 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 GOLGA6L10A0A0M3HER8 536 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
USP38-202ENST00000510377 VIMP08670 466 aaKnown RBP16.42■□□□□ 0.22
USP38-202ENST00000510377 MAN2A1Q16706 1144 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 FBXW10Q5XX13 1052 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
USP38-202ENST00000510377 LARP4BQ92615 738 aaKnown RBP16.42■□□□□ 0.22
USP38-202ENST00000510377 CDHR2Q9BYE9 1310 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 FANCGO15287 622 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 AP1M1Q9BXS5 423 aa16.42■□□□□ 0.22
USP38-202ENST00000510377 FAM208AQ9UK61 1670 aaKnown RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 WNT7AO00755 349 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 BACH1O14867 736 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 MAP2K2P36507 400 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 VWA3BQ502W6 1294 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 PIGSQ96S52 555 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 XRN1Q8IZH2 1706 aaKnown RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 KRIT1O00522 736 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 TRIM37O94972 964 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 ARHGAP25P42331 645 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 PMS1P54277 932 aaKnown RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 FAM26FQ5R3K3 315 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 POTEMA6NI47 508 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 KRT14P02533 472 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
USP38-202ENST00000510377 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 EHD4Q9H223 541 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 ATP8A2Q9NTI2 1148 aa16.41■□□□□ 0.22
USP38-202ENST00000510377 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 NEFHP12036 1026 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 LLGL1Q15334 1064 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 LRRC45Q96CN5 670 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 DMGDHQ9UI17 866 aaKnown RBP16.4■□□□□ 0.22
USP38-202ENST00000510377 GUCY1A3Q02108 690 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
USP38-202ENST00000510377 PAIP2Q9BPZ3 127 aaKnown RBP16.4■□□□□ 0.22
USP38-202ENST00000510377 PANK4Q9NVE7 773 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 MAP2K7O14733 419 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 PALMO75781 387 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 NR1D1P20393 614 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 JPH2Q9BR39 696 aaPredicted RBP16.4■□□□□ 0.22
USP38-202ENST00000510377 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 SNX12Q9UMY4 172 aa16.4■□□□□ 0.22
USP38-202ENST00000510377 VEGFAP15692 232 aaPredicted RBP16.39■□□□□ 0.21
USP38-202ENST00000510377 IRAK1P51617 712 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 SLC1A4P43007 532 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 SIK1P57059 783 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 HERVK_113P62684 666 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 TROAPQ12815 778 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 PKN1Q16512 942 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 TCRBV5S4A2TA0A5A2 114 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 EZRP15311 586 aaKnown RBP16.39■□□□□ 0.21
USP38-202ENST00000510377 ADAM9Q13443 819 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 TMEM260Q9NX78 707 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 RAB21Q9UL25 225 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.39■□□□□ 0.21
USP38-202ENST00000510377 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
USP38-202ENST00000510377 ANO9A1A5B4 782 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 PSMD14O00487 310 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 CHMP2AO43633 222 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
USP38-202ENST00000510377 CCDC155Q8N6L0 562 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 RDH13Q8NBN7 331 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 HDAC7Q8WUI4 952 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
USP38-202ENST00000510377 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 KIAA1024Q9UPX6 916 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 A0A1W2PQC6 194 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 RXRBP28702 533 aa16.38■□□□□ 0.21
USP38-202ENST00000510377 MRPL12P52815 198 aaKnown RBP16.38■□□□□ 0.21
USP38-202ENST00000510377 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms