RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 USP24Q9UPU5 2620 aa13.02□□□□□ -0.33
SNF8-207ENST00000509995 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 OAZ1P54368 228 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 RBL2Q08999 1139 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNF8-207ENST00000509995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNF8-207ENST00000509995 SMRP1Q8NCR6 262 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 RIPOR3Q96MK2 946 aa13.01□□□□□ -0.33
SNF8-207ENST00000509995 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
SNF8-207ENST00000509995 MAGEB6P1A0A0J9YX57 407 aa13□□□□□ -0.33
SNF8-207ENST00000509995 LINC01565O15544 149 aa13□□□□□ -0.33
SNF8-207ENST00000509995 AMHP03971 560 aa13□□□□□ -0.33
SNF8-207ENST00000509995 ICAM3P32942 547 aa13□□□□□ -0.33
SNF8-207ENST00000509995 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
SNF8-207ENST00000509995 TNNI3KQ59H18 835 aa13□□□□□ -0.33
SNF8-207ENST00000509995 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
SNF8-207ENST00000509995 OR6J1Q8NGC5 347 aa13□□□□□ -0.33
SNF8-207ENST00000509995 DHX38Q92620 1227 aaKnown RBP13□□□□□ -0.33
SNF8-207ENST00000509995 KIFC2Q96AC6 838 aa13□□□□□ -0.33
SNF8-207ENST00000509995 GPR108Q9NPR9 543 aa13□□□□□ -0.33
SNF8-207ENST00000509995 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
SNF8-207ENST00000509995 RBAK-RBAKDNI3L0D1 243 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 NDUFB10O96000 172 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 CKBP12277 381 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 CDK8P49336 464 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 NDUFV1P49821 464 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNF8-207ENST00000509995 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 BRDTQ58F21 947 aaPredicted RBP12.99□□□□□ -0.33
SNF8-207ENST00000509995 TMEM105Q8N8V8 129 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 LMAN2LQ9H0V9 348 aa12.99□□□□□ -0.33
SNF8-207ENST00000509995 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 RAD50Q92878 1312 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 KPNA6O60684 536 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 ADAM15Q13444 863 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 GDF6Q6KF10 455 aaPredicted RBP12.98□□□□□ -0.33
SNF8-207ENST00000509995 MORC4Q8TE76 937 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 PHF7Q9BWX1 381 aaPredicted RBP12.98□□□□□ -0.33
SNF8-207ENST00000509995 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 RNF146Q9NTX7 359 aa12.98□□□□□ -0.33
SNF8-207ENST00000509995 ASPMQ8IZT6 3477 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 F5H6K3 240 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 RRP1P56182 461 aaKnown RBP12.97□□□□□ -0.33
SNF8-207ENST00000509995 KLRC3Q07444 240 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 COASYQ13057 564 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
SNF8-207ENST00000509995 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 C16orf86Q6ZW13 317 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 SESTD1Q86VW0 696 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 RPGRIP1Q96KN7 1286 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 ANTXR1Q9H6X2 564 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 USP15Q9Y4E8 981 aaPredicted RBP12.97□□□□□ -0.33
SNF8-207ENST00000509995 OTOGLQ3ZCN5 2332 aa12.97□□□□□ -0.33
SNF8-207ENST00000509995 A6NJR5 290 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 C5orf67F2Z3F1 127 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 GRM6O15303 877 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 LGR5O75473 907 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 CTNNB1P35222 781 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 CHMP4BP1P59074 171 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
SNF8-207ENST00000509995 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNF8-207ENST00000509995 DLL3Q9NYJ7 618 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 CLEC1BQ9P126 229 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
SNF8-207ENST00000509995 FEM1BQ9UK73 627 aa12.96□□□□□ -0.33
SNF8-207ENST00000509995 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 RBM47A0AV96 593 aaKnown RBP12.95□□□□□ -0.34
SNF8-207ENST00000509995 E9PSI1 815 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 TLR7Q9NYK1 1049 aaKnown RBP12.95□□□□□ -0.34
SNF8-207ENST00000509995 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 MYO10Q9HD67 2058 aa12.95□□□□□ -0.34
SNF8-207ENST00000509995 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
SNF8-207ENST00000509995 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNF8-207ENST00000509995 CSPG5O95196 566 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 RB1P06400 928 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 GNAI3P08754 354 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
SNF8-207ENST00000509995 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
SNF8-207ENST00000509995 MMP1P03956 469 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 LINC00271P0C7V0 271 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 FDX1P10109 184 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 PDE6AP16499 860 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms