RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 KAT2BQ92831 832 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 NECAB3Q96P71 396 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-202ENST00000509637 SEZ6LQ9BYH1 1024 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 CERS4Q9HA82 394 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 PCDHA11Q9Y5I1 949 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 IQCF3P0C7M6 154 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 PDE4DQ08499 809 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 SLC35G1Q2M3R5 365 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
RAB40C-202ENST00000509637 SYTL5Q8TDW5 730 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-202ENST00000509637 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
RAB40C-202ENST00000509637 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
RAB40C-202ENST00000509637 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
RAB40C-202ENST00000509637 ZBBXA8MT70 800 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 TNFRSF10AO00220 468 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 OPLAHO14841 1288 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
RAB40C-202ENST00000509637 ATP2A2P16615 1042 aaKnown RBP18.69■□□□□ 0.58
RAB40C-202ENST00000509637 CPT1AP50416 773 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 TFF2Q03403 129 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 ARHGAP1Q07960 439 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 PPP2R5BQ15173 497 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 LY6KQ17RY6 165 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 FAM47CQ5HY64 1035 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-202ENST00000509637 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 AFG1LQ8WV93 481 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 ATXN2LQ8WWM7 1075 aaKnown RBP18.69■□□□□ 0.58
RAB40C-202ENST00000509637 ANKS1AQ92625 1134 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
RAB40C-202ENST00000509637 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 B4E1Z4 1266 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 KDM4AO75164 1064 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 CA3P07451 260 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 HIC1Q14526 733 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 PPP2R2DQ66LE6 453 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 GDF6Q6KF10 455 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-202ENST00000509637 NFRKBQ6P4R8 1299 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 ADGRF4Q8IZF3 695 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 RGS22Q8NE09 1264 aa18.68■□□□□ 0.58
RAB40C-202ENST00000509637 SUPT20HL2P0C7V6 817 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 BMP1P13497 986 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 CDC37Q16543 378 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-202ENST00000509637 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 STAG2Q8N3U4 1231 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 ADAMTS19Q8TE59 1207 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 WNT8BQ93098 351 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 MTIF3Q9H2K0 278 aaKnown RBP18.67■□□□□ 0.58
RAB40C-202ENST00000509637 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 ZSWIM5Q9P217 1185 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 MTCH2Q9Y6C9 303 aa18.67■□□□□ 0.58
RAB40C-202ENST00000509637 NKRFO15226 690 aaKnown RBP eCLIP18.66■□□□□ 0.58
RAB40C-202ENST00000509637 PPP1R11O60927 126 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-202ENST00000509637 MMP3P08254 477 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 TAP1Q03518 808 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 QRICH1Q2TAL8 776 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 SEPT14Q6ZU15 432 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 ENAHQ8N8S7 591 aaPredicted RBP18.66■□□□□ 0.58
RAB40C-202ENST00000509637 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 TANC1Q9C0D5 1861 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
RAB40C-202ENST00000509637 LCHNA4D1U4 455 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 LPXNO60711 386 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 RGS20O76081 388 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 MRPS5P82675 430 aaKnown RBP18.65■□□□□ 0.58
RAB40C-202ENST00000509637 GPATCH4Q5T3I0 446 aaKnown RBP18.65■□□□□ 0.58
RAB40C-202ENST00000509637 TRAF7Q6Q0C0 670 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 CWC27Q6UX04 472 aaKnown RBP18.65■□□□□ 0.58
RAB40C-202ENST00000509637 MICALL1Q8N3F8 863 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 ESR2Q92731 530 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 VAT1LQ9HCJ6 419 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-202ENST00000509637 LAMA4Q16363 1823 aa18.65■□□□□ 0.58
RAB40C-202ENST00000509637 NCOR1O75376 2440 aa18.64■□□□□ 0.58
RAB40C-202ENST00000509637 PITPNM1O00562 1244 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 PFKMP08237 780 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 POU3F3P20264 500 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 KCNQ1P51787 676 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 ZNF200P98182 395 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 PTPN11Q06124 597 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 CHST3Q7LGC8 479 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 ZFP91Q96JP5 570 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 BCAS3Q9H6U6 928 aa18.64■□□□□ 0.57
RAB40C-202ENST00000509637 DDX41Q9UJV9 622 aaKnown RBP18.64■□□□□ 0.57
RAB40C-202ENST00000509637 MYH7BA7E2Y1 1941 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 ZNF213O14771 459 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 KPNA6O60684 536 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 NBNO60934 754 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 DEFB103AP81534 67 aa18.63■□□□□ 0.57
RAB40C-202ENST00000509637 NUCB1Q02818 461 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms