RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.2
HMGCR-208ENST00000509431 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 EYA4O95677 639 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 HYAL1Q12794 435 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
HMGCR-208ENST00000509431 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
HMGCR-208ENST00000509431 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
HMGCR-208ENST00000509431 C12orf60Q5U649 245 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 SESTD1Q86VW0 696 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
HMGCR-208ENST00000509431 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
HMGCR-208ENST00000509431 TBX10O75333 385 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 CKBP12277 381 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 TCTN1Q2MV58 587 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
HMGCR-208ENST00000509431 MYOCDQ8IZQ8 938 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 MYH4Q9Y623 1939 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 MYO15AQ9UKN7 3530 aa16.31■□□□□ 0.2
HMGCR-208ENST00000509431 A6NJR5 290 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 GNAI2P04899 355 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 RB1P06400 928 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 PDE6AP16499 860 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 SLC9C2Q5TAH2 1124 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 YME1L1Q96TA2 773 aa16.3■□□□□ 0.2
HMGCR-208ENST00000509431 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
HMGCR-208ENST00000509431 LGR5O75473 907 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 ICAM3P32942 547 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGCR-208ENST00000509431 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 DHX38Q92620 1227 aaKnown RBP16.29■□□□□ 0.2
HMGCR-208ENST00000509431 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 CTAGE1Q96RT6 745 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGCR-208ENST00000509431 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 ADD3Q9UEY8 706 aaKnown RBP16.29■□□□□ 0.2
HMGCR-208ENST00000509431 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
HMGCR-208ENST00000509431 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
HMGCR-208ENST00000509431 EMSYQ7Z589 1322 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 LCTP09848 1927 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 C5orf67F2Z3F1 127 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 NDUFV1P49821 464 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
HMGCR-208ENST00000509431 ADAM15Q13444 863 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
HMGCR-208ENST00000509431 SMRP1Q8NCR6 262 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 CNTNAP3BQ96NU0 1288 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 C11orf84Q9BUA3 381 aaPredicted RBP16.28■□□□□ 0.2
HMGCR-208ENST00000509431 CNTNAP3Q9BZ76 1288 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 TLR7Q9NYK1 1049 aaKnown RBP16.28■□□□□ 0.2
HMGCR-208ENST00000509431 RWDD3Q9Y3V2 267 aa16.28■□□□□ 0.2
HMGCR-208ENST00000509431 NCOR2Q9Y618 2525 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 ZNF532Q9HCE3 1301 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 E9PSI1 815 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 COASYQ13057 564 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
HMGCR-208ENST00000509431 FRMD5Q7Z6J6 570 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 LRRC47Q8N1G4 583 aaKnown RBP16.27■□□□□ 0.2
HMGCR-208ENST00000509431 RMDN1Q96DB5 314 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 PHF7Q9BWX1 381 aaPredicted RBP16.27■□□□□ 0.2
HMGCR-208ENST00000509431 CCDC8Q9H0W5 538 aaPredicted RBP16.27■□□□□ 0.2
HMGCR-208ENST00000509431 MRS2Q9HD23 443 aa16.27■□□□□ 0.2
HMGCR-208ENST00000509431 ALAS1P13196 640 aa16.26■□□□□ 0.19
HMGCR-208ENST00000509431 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
HMGCR-208ENST00000509431 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
HMGCR-208ENST00000509431 TOP1MTQ969P6 601 aa16.26■□□□□ 0.19
HMGCR-208ENST00000509431 IGFLR1Q9H665 355 aa16.26■□□□□ 0.19
HMGCR-208ENST00000509431 BAHCC1Q9P281 2608 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 CYP2D7A0A087X1C5 515 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 CTNNB1P35222 781 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 ALDH5A1P51649 535 aaPredicted RBP16.25■□□□□ 0.19
HMGCR-208ENST00000509431 STAT2P52630 851 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
HMGCR-208ENST00000509431 CHMP4BP1P59074 171 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 PTK7Q13308 1070 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 POLA2Q14181 598 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 GMCL1P1Q8NEA9 526 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 MKL1Q969V6 931 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 ACACBO00763 2458 aa16.25■□□□□ 0.19
HMGCR-208ENST00000509431 BMP3P12645 472 aa16.24■□□□□ 0.19
HMGCR-208ENST00000509431 TRAF7Q6Q0C0 670 aa16.24■□□□□ 0.19
HMGCR-208ENST00000509431 NSMFQ6X4W1 530 aa16.24■□□□□ 0.19
HMGCR-208ENST00000509431 DBF4BQ8NFT6 615 aa16.24■□□□□ 0.19
HMGCR-208ENST00000509431 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
HMGCR-208ENST00000509431 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
HMGCR-208ENST00000509431 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
HMGCR-208ENST00000509431 EP300Q09472 2414 aaPredicted RBP16.24■□□□□ 0.19
HMGCR-208ENST00000509431 LINC01565O15544 149 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms