RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 MAFAQ8NHW3 353 aaPredicted RBP17.95■□□□□ 0.46
TPM3-219ENST00000509409 TIFAQ96CG3 184 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 TAAR1Q96RJ0 339 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 JMJD4Q9H9V9 463 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 UMODL1Q5DID0 1318 aa17.95■□□□□ 0.46
TPM3-219ENST00000509409 GRXCR1A8MXD5 290 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 KPNA6O60684 536 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 GSPT1P15170 499 aaKnown RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 SEPT14Q6ZU15 432 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
TPM3-219ENST00000509409 RPUSD2Q8IZ73 545 aaKnown RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 SYTL5Q8TDW5 730 aaPredicted RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 NSUN6Q8TEA1 469 aaKnown RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 MAF1Q9H063 256 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 IL25Q9H293 177 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 ZNF576Q9H609 170 aa17.94■□□□□ 0.46
TPM3-219ENST00000509409 TRMT13Q9NUP7 481 aaKnown RBP17.94■□□□□ 0.46
TPM3-219ENST00000509409 CYP2C9P11712 490 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 GRIN2CQ14957 1233 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 STXBP2Q15833 593 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 ARHGEF16Q5VV41 709 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 HERVK_113Q902F9 699 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 RMDN3Q96TC7 470 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 MSRAQ9UJ68 235 aa17.93■□□□□ 0.46
TPM3-219ENST00000509409 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
TPM3-219ENST00000509409 ERICH2A1L162 156 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 KLRF2D3W0D1 207 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 CFBP00751 764 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 PBX2P40425 430 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 RASIP1Q5U651 963 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 PPP1R13LQ8WUF5 828 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 SCLYQ96I15 445 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 IWS1Q96ST2 819 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 AMNQ9BXJ7 453 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 PBX4Q9BYU1 374 aa17.92■□□□□ 0.46
TPM3-219ENST00000509409 A6NJR5 290 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
TPM3-219ENST00000509409 ARIH2O95376 493 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 CHMLP26374 656 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 PTH1RQ03431 593 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 LY6KQ17RY6 165 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 CHST3Q7LGC8 479 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 COL20A1Q9P218 1284 aa17.91■□□□□ 0.46
TPM3-219ENST00000509409 ZBBXA8MT70 800 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 GH1P01241 217 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 EIF2AK2P19525 551 aaKnown RBP17.9■□□□□ 0.46
TPM3-219ENST00000509409 SEC23AQ15436 765 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 RAB30Q15771 203 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 NFRKBQ6P4R8 1299 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 RALYLQ86SE5 291 aaKnown RBP17.9■□□□□ 0.46
TPM3-219ENST00000509409 RETREG2Q8NC44 543 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 AFG1LQ8WV93 481 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
TPM3-219ENST00000509409 MAD2L2Q9UI95 211 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 NOD1Q9Y239 953 aa17.9■□□□□ 0.46
TPM3-219ENST00000509409 ZBTB5O15062 677 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 CYP21A2P08686 494 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 CCDC62Q6P9F0 684 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 DEFB128Q7Z7B8 93 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 GAS2L1Q99501 681 aaPredicted RBP17.89■□□□□ 0.45
TPM3-219ENST00000509409 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
TPM3-219ENST00000509409 PALM3A6NDB9 673 aaPredicted RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 EIF3JO75822 258 aaKnown RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 NR3C2P08235 984 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 MYCLP12524 364 aaPredicted RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 CASTP20810 708 aaKnown RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 PTPN11Q06124 597 aaPredicted RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 WTAPQ15007 396 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
TPM3-219ENST00000509409 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 PXMP2Q9NR77 195 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 MRVI1Q9Y6F6 885 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 LCTP09848 1927 aa17.88■□□□□ 0.45
TPM3-219ENST00000509409 LRRC37A2A6NM11 1700 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 E7EWF7 191 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 TRAF1Q13077 416 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.457e-6■■□□□ 12.9
TPM3-219ENST00000509409 NKX2-4Q9H2Z4 354 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 PRDM12Q9H4Q4 367 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 SLC28A3Q9HAS3 691 aa17.87■□□□□ 0.45
TPM3-219ENST00000509409 SGSM2O43147 1006 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 PFKMP08237 780 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 MMP3P08254 477 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 RABGGTBP53611 331 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 ARHGAP1Q07960 439 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 BFSP2Q13515 415 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 GRM4Q14833 912 aa17.86■□□□□ 0.45
TPM3-219ENST00000509409 DGKDQ16760 1214 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms