RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 RPUSD2Q8IZ73 545 aaKnown RBP18.01■□□□□ 0.47
SMAD5-205ENST00000509297 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 WNT8AQ9H1J5 351 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
SMAD5-205ENST00000509297 PFKMP08237 780 aa18■□□□□ 0.47
SMAD5-205ENST00000509297 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
SMAD5-205ENST00000509297 TXNP10599 105 aaKnown RBP18■□□□□ 0.47
SMAD5-205ENST00000509297 TTLL4Q14679 1199 aa18■□□□□ 0.47
SMAD5-205ENST00000509297 CCDC62Q6P9F0 684 aa18■□□□□ 0.47
SMAD5-205ENST00000509297 SYTL5Q8TDW5 730 aaPredicted RBP18■□□□□ 0.47
SMAD5-205ENST00000509297 NSUN6Q8TEA1 469 aaKnown RBP18■□□□□ 0.47
SMAD5-205ENST00000509297 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
SMAD5-205ENST00000509297 COL25A1Q9BXS0 654 aaPredicted RBP18■□□□□ 0.47
SMAD5-205ENST00000509297 CPVLQ9H3G5 476 aa18■□□□□ 0.47
SMAD5-205ENST00000509297 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
SMAD5-205ENST00000509297 MYL3P08590 195 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 GHRHRQ02643 423 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 QRICH1Q2TAL8 776 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
SMAD5-205ENST00000509297 CXXC1Q9P0U4 656 aaPredicted RBP17.99■□□□□ 0.47
SMAD5-205ENST00000509297 MSRAQ9UJ68 235 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
SMAD5-205ENST00000509297 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
SMAD5-205ENST00000509297 GRXCR1A8MXD5 290 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 PBX2P40425 430 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 CCL23P55773 120 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 NBPF20Q3BBV1 942 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 VWCEQ96DN2 955 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
SMAD5-205ENST00000509297 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 ARIH2O95376 493 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 RFC2P35250 354 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 SEC23AQ15436 765 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 STXBP2Q15833 593 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 IFIT1BQ5T764 474 aaKnown RBP17.97■□□□□ 0.47
SMAD5-205ENST00000509297 TTC22Q5TAA0 569 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 MTMR8Q96EF0 704 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 TAAR1Q96RJ0 339 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 RMDN3Q96TC7 470 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 IL25Q9H293 177 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
SMAD5-205ENST00000509297 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
SMAD5-205ENST00000509297 EIF3JO75822 258 aaKnown RBP17.96■□□□□ 0.47
SMAD5-205ENST00000509297 CYP2C9P11712 490 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
SMAD5-205ENST00000509297 PDE4AP27815 886 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 OTOP2Q7RTS6 562 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 SAMD3Q8N6K7 520 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 COPS5Q92905 334 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 EMID1Q96A84 441 aaPredicted RBP17.96■□□□□ 0.47
SMAD5-205ENST00000509297 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 SLC4A7Q9Y6M7 1214 aa17.96■□□□□ 0.47
SMAD5-205ENST00000509297 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
SMAD5-205ENST00000509297 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
SMAD5-205ENST00000509297 GH1P01241 217 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 HSD17B4P51659 736 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 ARHGAP1Q07960 439 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 TRAF1Q13077 416 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 SCLYQ96I15 445 aa17.95■□□□□ 0.46
SMAD5-205ENST00000509297 GAS2L1Q99501 681 aaPredicted RBP17.95■□□□□ 0.46
SMAD5-205ENST00000509297 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
SMAD5-205ENST00000509297 TRANK1O15050 2925 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 OPLAHO14841 1288 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 TRDNQ13061 729 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 FAM47CQ5HY64 1035 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 STAG2Q8N3U4 1231 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 AFG1LQ8WV93 481 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 SLC28A3Q9HAS3 691 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 VAT1LQ9HCJ6 419 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
SMAD5-205ENST00000509297 PCDHA11Q9Y5I1 949 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
SMAD5-205ENST00000509297 ZBTB5O15062 677 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 NR3C2P08235 984 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 MMP3P08254 477 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 BFSP2Q13515 415 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 ARHGEF16Q5VV41 709 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 SEPT14Q6ZU15 432 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 PXMP2Q9NR77 195 aa17.93■□□□□ 0.46
SMAD5-205ENST00000509297 YBX2Q9Y2T7 364 aaKnown RBP17.93■□□□□ 0.46
SMAD5-205ENST00000509297 CYP21A2P08686 494 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 ACTN1P12814 892 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 ATP2A2P16615 1042 aaKnown RBP17.92■□□□□ 0.46
SMAD5-205ENST00000509297 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
SMAD5-205ENST00000509297 CHMLP26374 656 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
SMAD5-205ENST00000509297 RETREG2Q8NC44 543 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms