RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RCAN1P53805 252 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 ATN1P54259 1190 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-220ENST00000508902 TNFAIP2Q03169 654 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 WWC2Q6AWC2 1192 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 ARRDC4Q8NCT1 418 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 DPF3Q92784 378 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 FERMT2Q96AC1 680 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 RMDN3Q96TC7 470 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 HTATIP2Q9BUP3 242 aa21.02■□□□□ 0.96
CLDND1-220ENST00000508902 FRMPD4Q14CM0 1322 aa21.02■□□□□ 0.95
CLDND1-220ENST00000508902 LTBP2Q14767 1821 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 TRIOBPQ9H2D6 2365 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 MEIS2O14770 477 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 RGS20O76081 388 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 PSMA5P28066 241 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 BEX3Q00994 111 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 SNX17Q15036 470 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 NTRK3Q16288 839 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 USP17L6PQ6QN14 398 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 COPS5Q92905 334 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 ZFP91Q96JP5 570 aaPredicted RBP21.01■□□□□ 0.95
CLDND1-220ENST00000508902 PDCD2LQ9BRP1 358 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 NCOA5Q9HCD5 579 aaKnown RBP21.01■□□□□ 0.95
CLDND1-220ENST00000508902 RBM28Q9NW13 759 aaKnown RBP21.01■□□□□ 0.95
CLDND1-220ENST00000508902 DOCK5Q9H7D0 1870 aa21.01■□□□□ 0.95
CLDND1-220ENST00000508902 A0A1W2PQ45 241 aaPredicted RBP21■□□□□ 0.95
CLDND1-220ENST00000508902 A0A1W2PQY0 241 aa21■□□□□ 0.95
CLDND1-220ENST00000508902 ADAMTS3O15072 1205 aa21■□□□□ 0.95
CLDND1-220ENST00000508902 PDIA3P30101 505 aaKnown RBP21■□□□□ 0.95
CLDND1-220ENST00000508902 METAP2P50579 478 aaKnown RBP eCLIP21■□□□□ 0.95
CLDND1-220ENST00000508902 TLK2Q86UE8 772 aa21■□□□□ 0.95
CLDND1-220ENST00000508902 C7orf61Q8IZ16 206 aa21■□□□□ 0.95
CLDND1-220ENST00000508902 KBTBD13C9JR72 458 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 PPFIA3O75145 1194 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 PDE4DQ08499 809 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 KCNA10Q16322 511 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 CCDC62Q6P9F0 684 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 SYNE3Q6ZMZ3 975 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 NSUN6Q8TEA1 469 aaKnown RBP20.99■□□□□ 0.95
CLDND1-220ENST00000508902 WDR11Q9BZH6 1224 aa20.99■□□□□ 0.95
CLDND1-220ENST00000508902 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
CLDND1-220ENST00000508902 MYH7BA7E2Y1 1941 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 GCOM1H8Y6P7 765 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-220ENST00000508902 NR3C2P08235 984 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 C6orf222P0C671 652 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-220ENST00000508902 POLR2MP0CAP2 368 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 ACLYP53396 1101 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 PGM5Q15124 567 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 PKN1Q16512 942 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 UBE2SQ16763 222 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 IQSEC1Q6DN90 963 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 SLC39A5Q6ZMH5 540 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 RNF180Q86T96 592 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 FCHSD1Q86WN1 690 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 SEC63Q9UGP8 760 aaKnown RBP20.98■□□□□ 0.95
CLDND1-220ENST00000508902 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 V9GY48 417 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-220ENST00000508902 LAMA3Q16787 3333 aa20.98■□□□□ 0.95
CLDND1-220ENST00000508902 SCN10AQ9Y5Y9 1956 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 STXBP3O00186 592 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 EVI5O60447 810 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 DTNBO60941 627 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 RTP1P59025 263 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 ANAPC15P60006 121 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 FGD1P98174 961 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 ARHGEF16Q5VV41 709 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 HEATR3Q7Z4Q2 680 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 PHKBQ93100 1093 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 IWS1Q96ST2 819 aa20.97■□□□□ 0.95
CLDND1-220ENST00000508902 TSEN34Q9BSV6 310 aaKnown RBP20.97■□□□□ 0.95
CLDND1-220ENST00000508902 MAP3K20Q9NYL2 800 aaKnown RBP20.97■□□□□ 0.95
CLDND1-220ENST00000508902 ZMYND8Q9ULU4 1186 aaPredicted RBP20.97■□□□□ 0.95
CLDND1-220ENST00000508902 PIK3CDO00329 1044 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 DYNC1LI2O43237 492 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-220ENST00000508902 ASGR1P07306 291 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 CCT2P78371 535 aaKnown RBP20.96■□□□□ 0.95
CLDND1-220ENST00000508902 MRPS9P82933 396 aaKnown RBP20.96■□□□□ 0.95
CLDND1-220ENST00000508902 TRIM60Q495X7 471 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 VSIG10LQ86VR7 867 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 SAMD3Q8N6K7 520 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 PDRG1Q9NUG6 133 aa20.96■□□□□ 0.95
CLDND1-220ENST00000508902 SYN1P17600 705 aa20.95■□□□□ 0.94
CLDND1-220ENST00000508902 SEMA3FQ13275 785 aa20.95■□□□□ 0.94
CLDND1-220ENST00000508902 SEPT14Q6ZU15 432 aa20.95■□□□□ 0.94
CLDND1-220ENST00000508902 PRO3102Q9H379 93 aa20.95■□□□□ 0.94
CLDND1-220ENST00000508902 GRIN2DO15399 1336 aa20.95■□□□□ 0.94
CLDND1-220ENST00000508902 ARHGAP1Q07960 439 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 TRAF1Q13077 416 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 PPP2R5BQ15173 497 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 STXBP2Q15833 593 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 FSCN1Q16658 493 aaKnown RBP20.94■□□□□ 0.94
CLDND1-220ENST00000508902 LY6KQ17RY6 165 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 GNASQ5JWF2 1037 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 NOL8Q76FK4 1167 aaKnown RBP20.94■□□□□ 0.94
CLDND1-220ENST00000508902 SCFD2Q8WU76 684 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 KIF2CQ99661 725 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 BCAS3Q9H6U6 928 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 TPCN1Q9ULQ1 816 aa20.94■□□□□ 0.94
CLDND1-220ENST00000508902 Q9Y3F1 56 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms