RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 KIAA1217Q5T5P2 1943 aa15.83■□□□□ 0.12
CCHCR1-227ENST00000508852 KLRF2D3W0D1 207 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 DLL1O00548 723 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 B4GALT4O60513 344 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 GSPT1P15170 499 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 DNAJB2P25686 324 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 CHMLP26374 656 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 RFC2P35250 354 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 RAB30Q15771 203 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 ZNF365Q70YC5 407 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 NCOA7Q8NI08 942 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 SYTL5Q8TDW5 730 aaPredicted RBP15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 NOC4LQ9BVI4 516 aaKnown RBP15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 GRIN2DO15399 1336 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
CCHCR1-227ENST00000508852 ZBTB5O15062 677 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 GH1P01241 217 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 PDE4AP27815 886 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 CYP2C18P33260 490 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 GHRHRQ02643 423 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 SEC23AQ15436 765 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 CCDC155Q8N6L0 562 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 TIFAQ96CG3 184 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 MTA3Q9BTC8 594 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 MSRAQ9UJ68 235 aa15.81■□□□□ 0.12
CCHCR1-227ENST00000508852 PALM3A6NDB9 673 aaPredicted RBP15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 IFIT3O14879 490 aaKnown RBP15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 ACTN1P12814 892 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 FOSL2P15408 326 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 CASTP20810 708 aaKnown RBP15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 PSMC6P62333 389 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 BFSP2Q13515 415 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 WTAPQ15007 396 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 C16orf59Q7L2K0 433 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 RETREG2Q8NC44 543 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 MTMR8Q96EF0 704 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 MAP3K14Q99558 947 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 TTYH1Q9H313 450 aaPredicted RBP15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 DDX49Q9Y6V7 483 aaKnown RBP15.8■□□□□ 0.12
CCHCR1-227ENST00000508852 SGSM2O43147 1006 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 PARNO95453 639 aaKnown RBP15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 CFBP00751 764 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 CYP21A2P08686 494 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 HSD17B4P51659 736 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 LAMC2Q13753 1193 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 DGKDQ16760 1214 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 CATIPQ7Z7H3 387 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 TMTC2Q8N394 836 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 MAFAQ8NHW3 353 aaPredicted RBP15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 EMID1Q96A84 441 aaPredicted RBP15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 TAAR1Q96RJ0 339 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 CPVLQ9H3G5 476 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 ZNF576Q9H609 170 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 PXMP2Q9NR77 195 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 MAD2L2Q9UI95 211 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 NOD1Q9Y239 953 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
CCHCR1-227ENST00000508852 NR3C2P08235 984 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 ACRP10323 421 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 TGFB3P10600 412 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 GRM4Q14833 912 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 TMEM63BQ5T3F8 832 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 SEPT14Q6ZU15 432 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 STOX1Q6ZVD7 989 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 CYB5R4Q7L1T6 521 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 SESTD1Q86VW0 696 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 MAP4K1Q92918 833 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 GAS2L1Q99501 681 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 RIOX1Q9H6W3 641 aa15.78■□□□□ 0.12
CCHCR1-227ENST00000508852 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 E7EWF7 191 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 STAM2O75886 525 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 SMARCA1P28370 1054 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 KIF5BP33176 963 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 CCL23P55773 120 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 CAGE1Q8TC20 777 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 MYLIPQ8WY64 445 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 LZTS2Q9BRK4 669 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 PBX4Q9BYU1 374 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 TRMT13Q9NUP7 481 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 SLC4A7Q9Y6M7 1214 aa15.77■□□□□ 0.12
CCHCR1-227ENST00000508852 GCOM1H8Y6P7 765 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-227ENST00000508852 MMP3P08254 477 aa15.76■□□□□ 0.11
CCHCR1-227ENST00000508852 POLR2MP0CAP2 368 aa15.76■□□□□ 0.11
CCHCR1-227ENST00000508852 EIF2AK2P19525 551 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-227ENST00000508852 PTGS1P23219 599 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms