RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 IWS1Q96ST2 819 aa19.57■□□□□ 0.72
CLDND1-219ENST00000508659 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
CLDND1-219ENST00000508659 GNEQ9Y223 722 aaKnown RBP19.57■□□□□ 0.72
CLDND1-219ENST00000508659 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
CLDND1-219ENST00000508659 CCDC196A0A1B0GTZ2 297 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 A0A1W2PQ45 241 aaPredicted RBP19.56■□□□□ 0.72
CLDND1-219ENST00000508659 A0A1W2PQY0 241 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 STXBP2Q15833 593 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 HEATR3Q7Z4Q2 680 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 FBXL16Q8N461 479 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 PCSK9Q8NBP7 692 aaKnown RBP19.56■□□□□ 0.72
CLDND1-219ENST00000508659 KLHDC9Q8NEP7 349 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 SCFD2Q8WU76 684 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 CUL5Q93034 780 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 TSEN34Q9BSV6 310 aaKnown RBP19.56■□□□□ 0.72
CLDND1-219ENST00000508659 WDR11Q9BZH6 1224 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 AP5M1Q9H0R1 490 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 ZSWIM6Q9HCJ5 1215 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 NID2Q14112 1375 aa19.56■□□□□ 0.72
CLDND1-219ENST00000508659 hCG_1642624A0A1W2PR95 340 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 ACLYP53396 1101 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 KCNA10Q16322 511 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 DUSP28Q4G0W2 176 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 FCHSD1Q86WN1 690 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 AGXT2Q9BYV1 514 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 UPF3BQ9BZI7 483 aaKnown RBP19.55■□□□□ 0.72
CLDND1-219ENST00000508659 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
CLDND1-219ENST00000508659 RTP1P59025 263 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
CLDND1-219ENST00000508659 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 FSCN1Q16658 493 aaKnown RBP19.54■□□□□ 0.72
CLDND1-219ENST00000508659 GNASQ5JWF2 1037 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 SLC39A5Q6ZMH5 540 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 SMARCC2Q8TAQ2 1214 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 GLT1D1Q96MS3 346 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 STARD7Q9NQZ5 370 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 ATP11BQ9Y2G3 1177 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 Q9Y3F1 56 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 ALPK3Q96L96 1907 aa19.54■□□□□ 0.72
CLDND1-219ENST00000508659 RBM47A0AV96 593 aaKnown RBP19.53■□□□□ 0.72
CLDND1-219ENST00000508659 NKRFO15226 690 aaKnown RBP eCLIP19.53■□□□□ 0.72
CLDND1-219ENST00000508659 ASGR1P07306 291 aa19.53■□□□□ 0.72
CLDND1-219ENST00000508659 CDC27P30260 824 aa19.53■□□□□ 0.72
CLDND1-219ENST00000508659 BEX3Q00994 111 aa19.53■□□□□ 0.72
CLDND1-219ENST00000508659 SNX17Q15036 470 aa19.53■□□□□ 0.72
CLDND1-219ENST00000508659 CCSAPQ6IQ19 270 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-219ENST00000508659 GPKOWQ92917 476 aaPredicted RBP eCLIP19.53■□□□□ 0.72
CLDND1-219ENST00000508659 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
CLDND1-219ENST00000508659 ZMYND8Q9ULU4 1186 aaPredicted RBP19.53■□□□□ 0.72
CLDND1-219ENST00000508659 hCG_1984214I3L0E3 225 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 DYNC1LI2O43237 492 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-219ENST00000508659 ZEB2O60315 1214 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 NR3C2P08235 984 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.72
CLDND1-219ENST00000508659 MYCLP12524 364 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-219ENST00000508659 PTGS1P23219 599 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 CCND2P30279 289 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 ANAPC15P60006 121 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 NKX3-2P78367 333 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 PGM5Q15124 567 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 TRIM60Q495X7 471 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 TMEM63BQ5T3F8 832 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 C1orf53Q5VUE5 145 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 SEPT14Q6ZU15 432 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 ZNF713Q8N859 430 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-219ENST00000508659 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.72
CLDND1-219ENST00000508659 FAM217BQ9NTX9 383 aaPredicted RBP19.52■□□□□ 0.72
CLDND1-219ENST00000508659 PIK3CDO00329 1044 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 CTAGE5O15320 804 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 EIF3JO75822 258 aaKnown RBP19.51■□□□□ 0.71
CLDND1-219ENST00000508659 SYN1P17600 705 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 ADD1P35611 737 aaKnown RBP19.51■□□□□ 0.71
CLDND1-219ENST00000508659 CPT1AP50416 773 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 NAPAP54920 295 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 FUT2Q10981 343 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
CLDND1-219ENST00000508659 WWC2Q6AWC2 1192 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 PPP1R18Q6NYC8 613 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 PSTPIP2Q9H939 334 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 PDRG1Q9NUG6 133 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 PRKAG2Q9UGJ0 569 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 MRVI1Q9Y6F6 885 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
CLDND1-219ENST00000508659 BAZ2BQ9UIF8 2168 aaKnown RBP19.5■□□□□ 0.71
CLDND1-219ENST00000508659 BRDTQ58F21 947 aaPredicted RBP19.5■□□□□ 0.71
CLDND1-219ENST00000508659 USP17L6PQ6QN14 398 aa19.5■□□□□ 0.71
CLDND1-219ENST00000508659 CHRDL2Q6WN34 429 aa19.5■□□□□ 0.71
CLDND1-219ENST00000508659 IL31RAQ8NI17 732 aa19.5■□□□□ 0.71
CLDND1-219ENST00000508659 VTI1AQ96AJ9 217 aa19.5■□□□□ 0.71
CLDND1-219ENST00000508659 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
CLDND1-219ENST00000508659 V9GY48 417 aaPredicted RBP19.5■□□□□ 0.71
CLDND1-219ENST00000508659 ELP1O95163 1332 aa19.5■□□□□ 0.71
CLDND1-219ENST00000508659 A0A0U1RQG5 324 aaPredicted RBP19.49■□□□□ 0.71
CLDND1-219ENST00000508659 MEIS2O14770 477 aa19.49■□□□□ 0.71
CLDND1-219ENST00000508659 ARIH2O95376 493 aa19.49■□□□□ 0.71
CLDND1-219ENST00000508659 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
CLDND1-219ENST00000508659 EVCP57679 992 aa19.49■□□□□ 0.71
CLDND1-219ENST00000508659 PRDM5Q9NQX1 630 aaPredicted RBP19.49■□□□□ 0.71
CLDND1-219ENST00000508659 SPDYE3A6NKU9 549 aa19.48■□□□□ 0.71
CLDND1-219ENST00000508659 PQBP1O60828 265 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms