RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 TNKSO95271 1327 aa12.35□□□□□ -0.43
SIL1-210ENST00000508639 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
SIL1-210ENST00000508639 LOC102724159A0A0B4J2E5 919 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 B4E1Z4 1266 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 RFXAPO00287 272 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 PPP1R11O60927 126 aaPredicted RBP12.34□□□□□ -0.43
SIL1-210ENST00000508639 KDM4AO75164 1064 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 MYL3P08590 195 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 HIC1Q14526 733 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 PWP2Q15269 919 aaKnown RBP12.34□□□□□ -0.43
SIL1-210ENST00000508639 DGKHQ86XP1 1220 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
SIL1-210ENST00000508639 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 SENP2Q9HC62 589 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
SIL1-210ENST00000508639 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
SIL1-210ENST00000508639 RGS20O76081 388 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
SIL1-210ENST00000508639 SEC23AQ15436 765 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 LY6KQ17RY6 165 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 USH1GQ495M9 461 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
SIL1-210ENST00000508639 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 PNMA1Q8ND90 353 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 OR6J1Q8NGC5 347 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 DHX38Q92620 1227 aaKnown RBP12.33□□□□□ -0.44
SIL1-210ENST00000508639 BCAS3Q9H6U6 928 aa12.33□□□□□ -0.44
SIL1-210ENST00000508639 ZEB2O60315 1214 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 IQCF3P0C7M6 154 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
SIL1-210ENST00000508639 PCP11498 1178 aaKnown RBP12.32□□□□□ -0.44
SIL1-210ENST00000508639 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
SIL1-210ENST00000508639 CDC37Q16543 378 aaPredicted RBP12.32□□□□□ -0.44
SIL1-210ENST00000508639 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
SIL1-210ENST00000508639 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
SIL1-210ENST00000508639 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 ZNF213O14771 459 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
SIL1-210ENST00000508639 PDE4DQ08499 809 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
SIL1-210ENST00000508639 KRT40Q6A162 431 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 GDF6Q6KF10 455 aaPredicted RBP12.31□□□□□ -0.44
SIL1-210ENST00000508639 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 ESR2Q92731 530 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 WNT8BQ93098 351 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
SIL1-210ENST00000508639 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
SIL1-210ENST00000508639 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
SIL1-210ENST00000508639 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
SIL1-210ENST00000508639 CPT1AP50416 773 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 GHRHRQ02643 423 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 PTH1RQ03431 593 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 RAB30Q15771 203 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 TJAP1Q5JTD0 557 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 SEPT14Q6ZU15 432 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 TMCO2Q7Z6W1 182 aaPredicted RBP12.3□□□□□ -0.44
SIL1-210ENST00000508639 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
SIL1-210ENST00000508639 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
SIL1-210ENST00000508639 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
SIL1-210ENST00000508639 VAT1LQ9HCJ6 419 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
SIL1-210ENST00000508639 HAS3O00219 553 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 CYTH3O43739 400 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 LPXNO60711 386 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 MMP3P08254 477 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 ATP2A2P16615 1042 aaKnown RBP12.29□□□□□ -0.44
SIL1-210ENST00000508639 HSD17B4P51659 736 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
SIL1-210ENST00000508639 SP2Q02086 613 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 MBTPS1Q14703 1052 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
SIL1-210ENST00000508639 RPUSD2Q8IZ73 545 aaKnown RBP12.29□□□□□ -0.44
SIL1-210ENST00000508639 IL31RAQ8NI17 732 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
SIL1-210ENST00000508639 CERS4Q9HA82 394 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
SIL1-210ENST00000508639 MYO7AQ13402 2215 aa12.28□□□□□ -0.44
SIL1-210ENST00000508639 LCHNA4D1U4 455 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms