RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TMTC3Q6ZXV5 915 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 JAKMIP1Q96N16 626 aaKnown RBP22.98■■□□□ 1.27
SFXN1-209ENST00000508290 TAAR1Q96RJ0 339 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 LRRC2Q9BYS8 371 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 COLQQ9Y215 455 aaPredicted RBP22.98■■□□□ 1.27
SFXN1-209ENST00000508290 ATP11BQ9Y2G3 1177 aa22.98■■□□□ 1.27
SFXN1-209ENST00000508290 CCDC196A0A1B0GTZ2 297 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 EIF3JO75822 258 aaKnown RBP22.97■■□□□ 1.27
SFXN1-209ENST00000508290 ASGR1P07306 291 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 BMP8BP34820 402 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 CPT1AP50416 773 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 TBC1D5Q92609 795 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 TOX2Q96NM4 488 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 PXMP2Q9NR77 195 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 PDGFCQ9NRA1 345 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 COL20A1Q9P218 1284 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 ALPK3Q96L96 1907 aa22.97■■□□□ 1.27
SFXN1-209ENST00000508290 MCM3APO60318 1980 aa22.96■■□□□ 1.27
SFXN1-209ENST00000508290 SMCHD1A6NHR9 2005 aa22.96■■□□□ 1.27
SFXN1-209ENST00000508290 DYNC1LI2O43237 492 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-209ENST00000508290 COL9A3Q14050 684 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-209ENST00000508290 HABP4Q5JVS0 413 aaKnown RBP22.96■■□□□ 1.27
SFXN1-209ENST00000508290 ANKRD33Q7Z3H0 272 aa22.96■■□□□ 1.27
SFXN1-209ENST00000508290 SRBD1Q8N5C6 995 aaKnown RBP22.96■■□□□ 1.27
SFXN1-209ENST00000508290 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
SFXN1-209ENST00000508290 ZMYND8Q9ULU4 1186 aaPredicted RBP22.96■■□□□ 1.27
SFXN1-209ENST00000508290 MYADML2A6NDP7 307 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 PIK3CDO00329 1044 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 CTAGE5O15320 804 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 PLEKHA8P1O95397 391 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 NR3C2P08235 984 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 MYH6P13533 1939 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 RTN1Q16799 776 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 TRIM60Q495X7 471 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 KCNV1Q6PIU1 500 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 CUL5Q93034 780 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 GDF15Q99988 308 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 POLR3EQ9NVU0 708 aa22.95■■□□□ 1.26
SFXN1-209ENST00000508290 A0A0U1RQG5 324 aaPredicted RBP22.94■■□□□ 1.26
SFXN1-209ENST00000508290 KLF18A0A0U1RQI7 1052 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 hCG_1984214I3L0E3 225 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 KPNA6O60684 536 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 STAM2O75886 525 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 RXRAP19793 462 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 RPS6KB1P23443 525 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 ZNF713Q8N859 430 aaPredicted RBP22.94■■□□□ 1.26
SFXN1-209ENST00000508290 LBHD1Q9BQE6 289 aaPredicted RBP22.94■■□□□ 1.26
SFXN1-209ENST00000508290 PDCD2LQ9BRP1 358 aa22.94■■□□□ 1.26
SFXN1-209ENST00000508290 DDX49Q9Y6V7 483 aaKnown RBP22.94■■□□□ 1.26
SFXN1-209ENST00000508290 DCDC2CA8MYV0 355 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 TXNP10599 105 aaKnown RBP22.93■■□□□ 1.26
SFXN1-209ENST00000508290 SYN1P17600 705 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 EIF2AK2P19525 551 aaKnown RBP22.93■■□□□ 1.26
SFXN1-209ENST00000508290 TCEANC2Q96MN5 208 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 USP26Q9BXU7 913 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 AGXT2Q9BYV1 514 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 TM6SF1Q9BZW5 370 aa22.93■■□□□ 1.26
SFXN1-209ENST00000508290 NID2Q14112 1375 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 GOLGA8AA7E2F4 631 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 GOLGA8BA8MQT2 603 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 SLC34A2O95436 690 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 CCND2P30279 289 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 TLE2Q04725 743 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 PPP1R18Q6NYC8 613 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 XRRA1Q6P2D8 792 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 Q6ZUG5 572 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 OR6J1Q8NGC5 347 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 VTI1AQ96AJ9 217 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
SFXN1-209ENST00000508290 BRPF3Q9ULD4 1205 aa22.92■■□□□ 1.26
SFXN1-209ENST00000508290 FRMPD4Q14CM0 1322 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 ARVCFO00192 962 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 CLTBP09497 229 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 TGFB3P10600 412 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 CASTP20810 708 aaKnown RBP22.91■■□□□ 1.26
SFXN1-209ENST00000508290 HOXA13P31271 388 aaPredicted RBP22.91■■□□□ 1.26
SFXN1-209ENST00000508290 BEX3Q00994 111 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 PGM5Q15124 567 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 CCDC62Q6P9F0 684 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 VSIG10LQ86VR7 867 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 SMARCC2Q8TAQ2 1214 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 PIBF1Q8WXW3 757 aa22.91■■□□□ 1.26
SFXN1-209ENST00000508290 A6NJR5 290 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 TLR3O15455 904 aaKnown RBP22.9■■□□□ 1.26
SFXN1-209ENST00000508290 GH1P01241 217 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 MAGEA10P43363 369 aaPredicted RBP22.9■■□□□ 1.26
SFXN1-209ENST00000508290 METAP2P50579 478 aaKnown RBP eCLIP22.9■■□□□ 1.26
SFXN1-209ENST00000508290 CDK7P50613 346 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 GNPTABQ3T906 1256 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 CXCL17Q6UXB2 119 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 RUFY3Q7L099 469 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 BRF1Q92994 677 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 GLT8D2Q9H1C3 349 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 PSTPIP2Q9H939 334 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 ZSWIM6Q9HCJ5 1215 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 PDLIM7Q9NR12 457 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 CYP46A1Q9Y6A2 500 aa22.9■■□□□ 1.26
SFXN1-209ENST00000508290 CNTNAP5Q8WYK1 1306 aa22.89■■□□□ 1.26
SFXN1-209ENST00000508290 PQBP1O60828 265 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms