RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 LRRC56Q8IYG6 542 aaPredicted RBP7.89□□□□□ -1.15
DHFR-204ENST00000508282 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 HIRIP3Q9BW71 556 aaPredicted RBP7.89□□□□□ -1.15
DHFR-204ENST00000508282 MARCH2Q9P0N8 246 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 PCDHA5Q9Y5H7 936 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 IQCA1LA6NCM1 817 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 PDPK1O15530 556 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 DLX3O60479 287 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 FBLN1P23142 703 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 NCKAP1LP55160 1127 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 ZNF200P98182 395 aaPredicted RBP7.88□□□□□ -1.15
DHFR-204ENST00000508282 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 KCNAB2Q13303 367 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 SERINC3Q13530 473 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 HSP90AA2PQ14568 343 aaPredicted RBP7.88□□□□□ -1.15
DHFR-204ENST00000508282 SPATC1Q76KD6 591 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 NETO2Q8NC67 525 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 RCBTB1Q8NDN9 531 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 USP33Q8TEY7 942 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 AARSD1Q9BTE6 412 aaKnown RBP7.88□□□□□ -1.15
DHFR-204ENST00000508282 BTG4Q9NY30 223 aa7.88□□□□□ -1.15
DHFR-204ENST00000508282 TIMM13Q9Y5L4 95 aaPredicted RBP7.88□□□□□ -1.15
DHFR-204ENST00000508282 IRS2Q9Y4H2 1338 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 CCDC85CA6NKD9 419 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
DHFR-204ENST00000508282 NTRK1P04629 796 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 LCP1P13796 627 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 LTBRP36941 435 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 TEX2Q8IWB9 1127 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 ZNF669Q96BR6 464 aaPredicted RBP7.87□□□□□ -1.15
DHFR-204ENST00000508282 SIGLEC10Q96LC7 697 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 CCDC113Q9H0I3 377 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 FBXL7Q9UJT9 491 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 DBR1Q9UK59 544 aaKnown RBP7.87□□□□□ -1.15
DHFR-204ENST00000508282 CNOT6Q9ULM6 557 aaKnown RBP7.87□□□□□ -1.15
DHFR-204ENST00000508282 KCTD3Q9Y597 815 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 NPFFR2Q9Y5X5 522 aa7.87□□□□□ -1.15
DHFR-204ENST00000508282 C22orf46C9J442 243 aa7.86□□□□□ -1.15
DHFR-204ENST00000508282 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
DHFR-204ENST00000508282 RASGRF1Q13972 1273 aa7.86□□□□□ -1.15
DHFR-204ENST00000508282 SF3A1Q15459 793 aaKnown RBP7.86□□□□□ -1.15
DHFR-204ENST00000508282 YOD1Q5VVQ6 348 aaPredicted RBP7.86□□□□□ -1.15
DHFR-204ENST00000508282 NLRP10Q86W26 655 aa7.86□□□□□ -1.15
DHFR-204ENST00000508282 LRRC47Q8N1G4 583 aaKnown RBP7.86□□□□□ -1.15
DHFR-204ENST00000508282 KCTD13Q8WZ19 329 aa7.86□□□□□ -1.15
DHFR-204ENST00000508282 EPB41L4AQ9HCS5 686 aaPredicted RBP7.86□□□□□ -1.15
DHFR-204ENST00000508282 IRAK3Q9Y616 596 aa7.86□□□□□ -1.15
DHFR-204ENST00000508282 PRODHO43272 600 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 NUAK1O60285 661 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 FGFR1P11362 822 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 PI3P19957 117 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 FPR2P25090 351 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 BCL6P41182 706 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 CIAPIN1Q6FI81 312 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 TMEFF1Q8IYR6 380 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 Q8N1Y9 231 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 OSBP2Q969R2 916 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 TSPAN17Q96FV3 270 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 PEX11GQ96HA9 241 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 SPATA9Q9BWV2 254 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 BCAS3Q9H6U6 928 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 PFDN2Q9UHV9 154 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
DHFR-204ENST00000508282 MYO1BO43795 1136 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 PABPC1P11940 636 aaKnown RBP7.84□□□□□ -1.15
DHFR-204ENST00000508282 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
DHFR-204ENST00000508282 RBM10P98175 930 aaKnown RBP7.84□□□□□ -1.15
DHFR-204ENST00000508282 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 LCNL1Q6ZST4 164 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 CEP68Q76N32 757 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 ZSCAN18Q8TBC5 510 aaPredicted RBP7.84□□□□□ -1.15
DHFR-204ENST00000508282 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 NUDT5Q9UKK9 219 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 PCDHA2Q9Y5H9 948 aa7.84□□□□□ -1.15
DHFR-204ENST00000508282 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 ADCY3O60266 1144 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
DHFR-204ENST00000508282 DIAPH1O60610 1272 aaKnown RBP7.83□□□□□ -1.16
DHFR-204ENST00000508282 GTF2A2P52657 109 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 RASA3Q14644 834 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 NTRK3Q16288 839 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 ZNF385BQ569K4 471 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 NSMFQ6X4W1 530 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 USP53Q70EK8 1073 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 KRTAP9-9Q9BYP9 154 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 KRTAP9-4Q9BYQ2 154 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 X6R8D5 127 aa7.83□□□□□ -1.16
DHFR-204ENST00000508282 FAM221BA6H8Z2 402 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 MSCO60682 206 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 ASGR2P07307 311 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 ATF2P15336 505 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 SLC9A5Q14940 896 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 SPOCD1Q6ZMY3 1216 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
DHFR-204ENST00000508282 RIOX2Q8IUF8 465 aa7.82□□□□□ -1.16
DHFR-204ENST00000508282 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
DHFR-204ENST00000508282 ALG3Q92685 438 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms