RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 NKX3-2P78367 333 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 RRP12Q5JTH9 1297 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 TTC22Q5TAA0 569 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 SLC39A5Q6ZMH5 540 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 RNF180Q86T96 592 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 TSEN34Q9BSV6 310 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 A1CFQ9NQ94 594 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 RNF146Q9NTX7 359 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-222ENST00000508238 BAZ2BQ9UIF8 2168 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ADAMTS4O75173 837 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 DUSP11O75319 330 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ADCYAP1R1P41586 468 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 MAGEA10P43363 369 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ZNF543Q08ER8 600 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ACVR2BQ13705 512 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 TMEM259Q4ZIN3 620 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ANO1Q5XXA6 986 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 TTBK2Q6IQ55 1244 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 KLHDC9Q8NEP7 349 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 MAF1Q9H063 256 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 KATNBL1Q9H079 304 aa9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-222ENST00000508238 NEDD4P46934 1319 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 RAD50Q92878 1312 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 LAMA4Q16363 1823 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 LOC102724159A0A0B4J2E5 919 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 ASB14A6NK59 587 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 AP1G2O75843 785 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 PGK1P00558 417 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 ALAS1P13196 640 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 SYN1P17600 705 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CST5P28325 142 aaPredicted RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 RTP1P59025 263 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CNTN2Q02246 1040 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 PWP2Q15269 919 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 IMMTQ16891 758 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 LRIT3Q3SXY7 679 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 GPATCH4Q5T3I0 446 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CCDC174Q6PII3 467 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 BRICD5Q6PL45 260 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 ARMCX2Q7L311 632 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 IQCA1Q86XH1 822 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 MORC4Q8TE76 937 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 MTRQ99707 1265 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 KRT23Q9C075 422 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 UPF3AQ9H1J1 476 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CNNM2Q9H8M5 875 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 HOMER2Q9NSB8 354 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CYP39A1Q9NYL5 469 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 ZSWIM5Q9P217 1185 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 CCPG1Q9ULG6 757 aa9.33□□□□□ -0.92
UBE2D3-222ENST00000508238 WDR19Q8NEZ3 1342 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 CHMLP26374 656 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 SLC16A2P36021 539 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 GJA9P57773 515 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 SNAP25P60880 206 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 CCDC144BQ3MJ40 725 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 RETREG3Q86VR2 466 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 RGS22Q8NE09 1264 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 RUFY2Q8WXA3 655 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 TSC1Q92574 1164 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 CHMP4CQ96CF2 233 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 THAP11Q96EK4 314 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 TOX2Q96NM4 488 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 IL25Q9H293 177 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 HCSTQ9UBK5 93 aa9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 ZHX1Q9UKY1 873 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-222ENST00000508238 ASTN1O14525 1302 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 ELP1O95163 1332 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 FRMPD2Q68DX3 1309 aaPredicted RBP9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 SYNRGQ9UMZ2 1314 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 B4E1Z4 1266 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 ACLYP53396 1101 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 IRX6P78412 446 aaPredicted RBP9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 TLE2Q04725 743 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 KCNA10Q16322 511 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 TRIM60Q495X7 471 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 IQSEC1Q6DN90 963 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 ANKRD33Q7Z3H0 272 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 TDHQ8IZJ6 230 aa9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 ENAHQ8N8S7 591 aaPredicted RBP9.31□□□□□ -0.92
UBE2D3-222ENST00000508238 PCSK9Q8NBP7 692 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms