RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
LIN54-207ENST00000508171 CTAGE8P0CG41 777 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 OAS2P29728 719 aaKnown RBP12.19□□□□□ -0.46
LIN54-207ENST00000508171 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
LIN54-207ENST00000508171 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 BRD3Q15059 726 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 ECM1Q16610 540 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 DOK7Q18PE1 504 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 BEND6Q5SZJ8 279 aaPredicted RBP12.19□□□□□ -0.46
LIN54-207ENST00000508171 CTAGE6Q86UF2 777 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 CTAGE4Q8IX94 777 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 MSANTD4Q8NCY6 345 aa12.19□□□□□ -0.46
LIN54-207ENST00000508171 IGKV6D-41A0A0C4DH26 115 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 POLRMTO00411 1230 aaKnown RBP12.18□□□□□ -0.46
LIN54-207ENST00000508171 EPHB6O15197 1021 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 IDEP14735 1019 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 ZBED6P86452 979 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 LRRC41Q15345 812 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 KIAA1328Q86T90 577 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
LIN54-207ENST00000508171 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 CDK5RAP3Q96JB5 506 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 CRAMP1Q96RY5 1269 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 ABCB6Q9NP58 842 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 PSMD14O00487 310 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 TTLL1O95922 423 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 VSNL1P62760 191 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 ZNF543Q08ER8 600 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 TRAPPC11Q7Z392 1133 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
LIN54-207ENST00000508171 PNMA6FA0A0J9YX94 578 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 USP17L10C9JJH3 530 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 MAP2K7O14733 419 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 SHMT1P34896 483 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 GYS2P54840 703 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 DDX12PQ92771 950 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 HAS1Q92839 578 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 ZNHIT6Q9NWK9 470 aaKnown RBP12.17□□□□□ -0.46
LIN54-207ENST00000508171 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
LIN54-207ENST00000508171 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
LIN54-207ENST00000508171 ZNF263O14978 683 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 KRT83P78385 493 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 PDIA5Q14554 519 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 TMEM266Q2M3C6 531 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 ZFPM1Q8IX07 1006 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 SP8Q8IXZ3 490 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 HNRNPLLQ8WVV9 542 aaKnown RBP12.17□□□□□ -0.46
LIN54-207ENST00000508171 RAD54LQ92698 747 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 RIC8AQ9NPQ8 531 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
LIN54-207ENST00000508171 STK17AQ9UEE5 414 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
LIN54-207ENST00000508171 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 H3BQF6 201 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 NFIAQ12857 509 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 VWA3BQ502W6 1294 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 COBLL1Q53SF7 1204 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 CAPZA3Q96KX2 299 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 MMS19Q96T76 1030 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 MACROD2A1Z1Q3 448 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 KRT86O43790 486 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 RAD21O60216 631 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 CCDC155Q8N6L0 562 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
LIN54-207ENST00000508171 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 SIK3Q9Y2K2 1263 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 SAR1BQ9Y6B6 198 aa12.16□□□□□ -0.46
LIN54-207ENST00000508171 FAM196BA6NMK8 535 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms