RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 PPP2R5BQ15173 497 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
DDR1-260ENST00000507533 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 FAM117BQ6P1L5 589 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 FBXO22Q8NEZ5 403 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 COPS5Q92905 334 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
DDR1-260ENST00000507533 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
DDR1-260ENST00000507533 CXCL10P02778 98 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 ICAM1P05362 532 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 TFAP4Q01664 338 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 HFE2Q6ZVN8 426 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 MFSD14AQ96MC6 490 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 C17orf80Q9BSJ5 609 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 CTNNA3Q9UI47 895 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 MYH4Q9Y623 1939 aa16.47■□□□□ 0.23
DDR1-260ENST00000507533 TET1Q8NFU7 2136 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 TANC1Q9C0D5 1861 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 NBNO60934 754 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 EFCAB14O75071 495 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 APPP05067 770 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 ZP2Q05996 745 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 PDE4BQ07343 736 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 PDE4DQ08499 809 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 IKBKEQ14164 716 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 PTPROQ16827 1216 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 GDF6Q6KF10 455 aaPredicted RBP16.46■□□□□ 0.23
DDR1-260ENST00000507533 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 OSBP2Q969R2 916 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 MRPL38Q96DV4 380 aaKnown RBP16.46■□□□□ 0.23
DDR1-260ENST00000507533 CTAGE1Q96RT6 745 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
DDR1-260ENST00000507533 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.22
DDR1-260ENST00000507533 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 NFIBO00712 420 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 HMMRO75330 724 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
DDR1-260ENST00000507533 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 DHX38Q92620 1227 aaKnown RBP16.45■□□□□ 0.22
DDR1-260ENST00000507533 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
DDR1-260ENST00000507533 STX8Q9UNK0 236 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 INSL6Q9Y581 213 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
DDR1-260ENST00000507533 GPAA1O43292 621 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 CKBP12277 381 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 GNAT2P19087 354 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 CALML3P27482 149 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 SLC30A10Q6XR72 485 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 ADHFE1Q8IWW8 467 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 BANK1Q8NDB2 785 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 APPBP2Q92624 585 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 PABPC5Q96DU9 382 aaKnown RBP16.44■□□□□ 0.22
DDR1-260ENST00000507533 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
DDR1-260ENST00000507533 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
DDR1-260ENST00000507533 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
DDR1-260ENST00000507533 RBL2Q08999 1139 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
DDR1-260ENST00000507533 RANBP17Q9H2T7 1088 aaKnown RBP16.43■□□□□ 0.22
DDR1-260ENST00000507533 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 ST18O60284 1047 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
DDR1-260ENST00000507533 EDNRBP24530 442 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 IRS1P35568 1242 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 CCDC96Q2M329 555 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 EPC2Q52LR7 807 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDR1-260ENST00000507533 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 AFG1LQ8WV93 481 aa16.42■□□□□ 0.22
DDR1-260ENST00000507533 LCTP09848 1927 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 M0R2C6 588 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 RNF113AO15541 343 aaKnown RBP16.41■□□□□ 0.22
DDR1-260ENST00000507533 ARIH2O95376 493 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 SLC16A2P36021 539 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 GPM6BQ13491 265 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 PRSS33Q8NF86 280 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 CLEC4DQ8WXI8 215 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 KAT2BQ92831 832 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 SAMD11Q96NU1 681 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 CLDND1Q9NY35 253 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
DDR1-260ENST00000507533 B4DLN1 442 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 H3BNC9 293 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 AMHP03971 560 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms