RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 SLC26A8Q96RN1 970 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 PDLIM7Q9NR12 457 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 MARCH2Q9P0N8 246 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 USP35Q9P2H5 1018 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 TRAF6Q9Y4K3 522 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 PCDHA2Q9Y5H9 948 aa5.33□□□□□ -1.56
CDC42SE2-210ENST00000506929 TRAV20A0A0B4J274 112 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 NFIBO00712 420 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 NTRK1P04629 796 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 TMEM253P0C7T8 217 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 GLI4P10075 376 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 FGFR1P11362 822 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 NCKAP1LP55160 1127 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 RAB3GAP1Q15042 981 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 LRRC47Q8N1G4 583 aaKnown RBP5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 LZTR1Q8N653 840 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 ZBTB38Q8NAP3 1195 aaPredicted RBP5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 NLGN2Q8NFZ4 835 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 GCM1Q9NP62 436 aa5.32□□□□□ -1.56
CDC42SE2-210ENST00000506929 IQCA1LA6NCM1 817 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 OR14I1A6ND48 311 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 NPHS1O60500 1241 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 CPP00450 1065 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 C6orf222P0C671 652 aaPredicted RBP5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 EPHB3P54753 998 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 YBX1P67809 324 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 MAP4K2Q12851 820 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 ANKLE2Q86XL3 938 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 KCTD13Q8WZ19 329 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 KCNN1Q92952 543 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 MKL1Q969V6 931 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 PHF20Q9BVI0 1012 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 CDIP1Q9H305 208 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 CNTD2Q9H8S5 307 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 NPFFR2Q9Y5X5 522 aa5.31□□□□□ -1.56
CDC42SE2-210ENST00000506929 TRBV23-1A0A0A0MS06 115 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 C22orf46C9J442 243 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 F8W031 263 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 ETV2O00321 342 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 PEX10O60683 326 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 IGSF3O75054 1194 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 C1QTNF9P0C862 333 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 GLDCP23378 1020 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 LTBRP36941 435 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 SRSF3P84103 164 aaKnown RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 PRR5P85299 388 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 IFRD2Q12894 506 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 SQSTM1Q13501 440 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 ACBD5Q5T8D3 534 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 CEP68Q76N32 757 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 TMC6Q7Z403 805 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 TOX2Q96NM4 488 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 MBD1Q9UIS9 605 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 TIMM13Q9Y5L4 95 aaPredicted RBP5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 PTCH2Q9Y6C5 1203 aa5.3□□□□□ -1.56
CDC42SE2-210ENST00000506929 A0A1W2PQJ5 194 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 SEMA7AO75326 666 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 MPOP05164 745 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 MED14OSP0DP75 135 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 ARL4AP40617 200 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 CDR1P51861 262 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 CBX2Q14781 532 aaPredicted RBP5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 TESK1Q15569 626 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 LRP10Q7Z4F1 713 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 CILP2Q8IUL8 1156 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 KISS1RQ969F8 398 aaPredicted RBP5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 ZNF669Q96BR6 464 aaPredicted RBP5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 CHAMP1Q96JM3 812 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 CDC6Q99741 560 aa5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 MRPS23Q9Y3D9 190 aaKnown RBP5.29□□□□□ -1.56
CDC42SE2-210ENST00000506929 MC3RP41968 323 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 CORO7P57737 925 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 RPL11P62913 178 aaKnown RBP5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 ZNF200P98182 395 aaPredicted RBP5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 KCNAB2Q13303 367 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 PAQR3Q6TCH7 311 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 ATG14Q6ZNE5 492 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 RBM12BQ8IXT5 1001 aaKnown RBP5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 JMYQ8N9B5 988 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 PANK1Q8TE04 598 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 CLDND1Q9NY35 253 aa5.28□□□□□ -1.56
CDC42SE2-210ENST00000506929 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.28□□□□□ -1.562e-9■■□□□ 13
CDC42SE2-210ENST00000506929 TRBV23OR9-2A0A075B6M9 112 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 TEX51A0A1B0GUA7 166 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 TCAF2A6NFQ2 919 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 NPIPB6E9PJ23 425 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 HRKO00198 91 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 SGSM2O43147 1006 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 SRGAP3O43295 1099 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 CYBBP04839 570 aa5.27□□□□□ -1.57
CDC42SE2-210ENST00000506929 COL6A2P12110 1019 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms