RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 MCMDC2Q4G0Z9 681 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-205ENST00000506924 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 EHD4Q9H223 541 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 HELLSQ9NRZ9 838 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 FAM13BQ9NYF5 915 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 AFG3L2Q9Y4W6 797 aa11.3□□□□□ -0.6
CLCN3-205ENST00000506924 ATXN7O15265 892 aaPredicted RBP11.29□□□□□ -0.6
CLCN3-205ENST00000506924 FOXP2O15409 715 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 CETPP11597 493 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 SERPINB4P48594 390 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 GABPAQ06546 454 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 SPP2Q13103 211 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 TATDN1Q6P1N9 297 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 IRF7Q92985 503 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 HSH2DQ96JZ2 352 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 ZBTB21Q9ULJ3 1066 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 IVNS1ABPQ9Y6Y0 642 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 PHIPQ8WWQ0 1821 aa11.29□□□□□ -0.6
CLCN3-205ENST00000506924 CDC14CA4D256 554 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 EFSO43281 561 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 CDK8P49336 464 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 INHBEP58166 350 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 TYRO3Q06418 890 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
CLCN3-205ENST00000506924 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 NAPBQ9H115 298 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
CLCN3-205ENST00000506924 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
CLCN3-205ENST00000506924 CA12O43570 354 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 PRDM1O75626 825 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 MICAL2O94851 1124 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 ABL1P00519 1130 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 ASNSP08243 561 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
CLCN3-205ENST00000506924 AKR1B1P15121 316 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 EPB42P16452 691 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 HMGCS2P54868 508 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
CLCN3-205ENST00000506924 MOGSQ13724 837 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 SEPT2Q15019 361 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 SBK1Q52WX2 424 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
CLCN3-205ENST00000506924 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 GTPBP3Q969Y2 492 aaKnown RBP11.27□□□□□ -0.61
CLCN3-205ENST00000506924 IL25Q9H293 177 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 CABP5Q9NP86 173 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
CLCN3-205ENST00000506924 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-205ENST00000506924 SOWAHDA6NJG2 315 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 PDHXO00330 501 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 CXCL11O14625 94 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 GUCY1A2P33402 732 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 ARSDP51689 593 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 TNP2Q05952 138 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 CRHR2Q13324 411 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-205ENST00000506924 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
CLCN3-205ENST00000506924 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 MKNK2Q9HBH9 465 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 AS3MTQ9HBK9 375 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 SAGE1Q9NXZ1 904 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 MYH8P13535 1937 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 CASP8AP2Q9UKL3 1982 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 LAMB1P07942 1786 aa11.26□□□□□ -0.61
CLCN3-205ENST00000506924 HIP1O00291 1037 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 BNIP3LO60238 219 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 FGAP02671 866 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 CHMLP26374 656 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 HAND2P61296 217 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 PPARAQ07869 468 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
CLCN3-205ENST00000506924 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 TREML1Q86YW5 311 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 FEZ1Q99689 392 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms