RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 PNMA6FA0A0J9YX94 578 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 EIF3JO75822 258 aaKnown RBP18.02■□□□□ 0.48
DDR1-258ENST00000506573 DDAH1O94760 285 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 MYL3P08590 195 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 CALM1P0DP23 149 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 CALM2P0DP24 149 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 CALM3P0DP25 149 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 IRX5P78411 483 aaPredicted RBP18.02■□□□□ 0.48
DDR1-258ENST00000506573 CHST3Q7LGC8 479 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 MTMR8Q96EF0 704 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
DDR1-258ENST00000506573 MTG1Q9BT17 334 aaPredicted RBP18.02■□□□□ 0.48
DDR1-258ENST00000506573 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
DDR1-258ENST00000506573 SEC63Q9UGP8 760 aaKnown RBP18.02■□□□□ 0.48
DDR1-258ENST00000506573 PRC1O43663 620 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 TROAPQ12815 778 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 FAM109BQ6ICB4 259 aaPredicted RBP18.01■□□□□ 0.47
DDR1-258ENST00000506573 KCNV1Q6PIU1 500 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 SYNE3Q6ZMZ3 975 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 MB21D2Q8IYB1 491 aaPredicted RBP18.01■□□□□ 0.47
DDR1-258ENST00000506573 SLC43A3Q8NBI5 491 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 TAAR1Q96RJ0 339 aa18.01■□□□□ 0.47
DDR1-258ENST00000506573 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
DDR1-258ENST00000506573 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
DDR1-258ENST00000506573 GCOM1H8Y6P7 765 aaPredicted RBP18■□□□□ 0.47
DDR1-258ENST00000506573 GH1P01241 217 aa18■□□□□ 0.47
DDR1-258ENST00000506573 POLR2MP0CAP2 368 aa18■□□□□ 0.47
DDR1-258ENST00000506573 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
DDR1-258ENST00000506573 HSD17B4P51659 736 aa18■□□□□ 0.47
DDR1-258ENST00000506573 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
DDR1-258ENST00000506573 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
DDR1-258ENST00000506573 SEPT14Q6ZU15 432 aa18■□□□□ 0.47
DDR1-258ENST00000506573 STOX1Q6ZVD7 989 aa18■□□□□ 0.47
DDR1-258ENST00000506573 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
DDR1-258ENST00000506573 TBC1D5Q92609 795 aa18■□□□□ 0.47
DDR1-258ENST00000506573 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
DDR1-258ENST00000506573 PIGSQ96S52 555 aa18■□□□□ 0.47
DDR1-258ENST00000506573 HIPK3Q9H422 1215 aa18■□□□□ 0.47
DDR1-258ENST00000506573 PXMP2Q9NR77 195 aa18■□□□□ 0.47
DDR1-258ENST00000506573 LRRC37A2A6NM11 1700 aa18■□□□□ 0.47
DDR1-258ENST00000506573 LTBP2Q14767 1821 aa18■□□□□ 0.47
DDR1-258ENST00000506573 A6NJR5 290 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 SLC27A2O14975 620 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 CD4P01730 458 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 NEFLP07196 543 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 NR3C2P08235 984 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 ITGB8P26012 769 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 SMARCA1P28370 1054 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 PURAQ00577 322 aaKnown RBP17.99■□□□□ 0.47
DDR1-258ENST00000506573 GHRHRQ02643 423 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 CREB3L3Q68CJ9 461 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 PSRC1Q6PGN9 363 aaPredicted RBP17.99■□□□□ 0.47
DDR1-258ENST00000506573 CUL5Q93034 780 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 MRVI1Q9Y6F6 885 aa17.99■□□□□ 0.47
DDR1-258ENST00000506573 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
DDR1-258ENST00000506573 CDC45O75419 566 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 LIFRP42702 1097 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 ANTXR2P58335 489 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 KRT32Q14532 448 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 FAM47CQ5HY64 1035 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 SLC12A7Q9Y666 1083 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 TAF6LQ9Y6J9 622 aa17.98■□□□□ 0.47
DDR1-258ENST00000506573 MYCLP12524 364 aaPredicted RBP17.97■□□□□ 0.47
DDR1-258ENST00000506573 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
DDR1-258ENST00000506573 CCND2P30279 289 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 PSMC6P62333 389 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 PTPN11Q06124 597 aaPredicted RBP17.97■□□□□ 0.47
DDR1-258ENST00000506573 LAMC2Q13753 1193 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 NECTIN1Q15223 517 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 TMEM63BQ5T3F8 832 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 NFRKBQ6P4R8 1299 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
DDR1-258ENST00000506573 ALDH8A1Q9H2A2 487 aaPredicted RBP17.97■□□□□ 0.47
DDR1-258ENST00000506573 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
DDR1-258ENST00000506573 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.96■□□□□ 0.47
DDR1-258ENST00000506573 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.96■□□□□ 0.47
DDR1-258ENST00000506573 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
DDR1-258ENST00000506573 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.47
DDR1-258ENST00000506573 PTGS1P23219 599 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 DGKDQ16760 1214 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 LY6KQ17RY6 165 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 GNPTABQ3T906 1256 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 CCDC62Q6P9F0 684 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 Q7L0L9 218 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 DHX37Q8IY37 1157 aaKnown RBP17.96■□□□□ 0.47
DDR1-258ENST00000506573 PDCD2LQ9BRP1 358 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 TRPV6Q9H1D0 765 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 SENP2Q9HC62 589 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 LCTP09848 1927 aa17.96■□□□□ 0.47
DDR1-258ENST00000506573 B4GALT4O60513 344 aa17.95■□□□□ 0.46
DDR1-258ENST00000506573 STAM2O75886 525 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms