RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 STAG2Q8N3U4 1231 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 FAM160A2Q8N612 972 aaPredicted RBP6.83□□□□□ -1.32
SCLT1-207ENST00000506233 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 ARPC5LQ9BPX5 153 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 CD209Q9NNX6 404 aa6.83□□□□□ -1.32
SCLT1-207ENST00000506233 IFNAR1P17181 557 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 BDNFP23560 247 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 PSMA5P28066 241 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 CRKP46108 304 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 TTF1Q15361 905 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 CRAMP1Q96RY5 1269 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 MTA3Q9BTC8 594 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 UNC93B1Q9H1C4 597 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 CLSTN2Q9H4D0 955 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 TCEAL9Q9UHQ7 104 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 KLF18A0A0U1RQI7 1052 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 USP5P45974 858 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 LARP1BQ659C4 914 aaKnown RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 POTEEQ6S8J3 1075 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 ANKRD18AQ8IVF6 992 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 UBR7Q8N806 425 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 MTMR8Q96EF0 704 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 SEC16BQ96JE7 1060 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 TCP11L1Q9NUJ3 509 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 RTCBQ9Y3I0 505 aaKnown RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 FLT1P17948 1338 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 ACTN4O43707 911 aaKnown RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 SCGB1D2O95969 90 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 MMP1P03956 469 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 NR5A1Q13285 461 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 C10orf62Q5T681 223 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 CDAN1Q8IWY9 1227 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 ETNK1Q9HBU6 452 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
SCLT1-207ENST00000506233 FOXD3Q9UJU5 478 aaPredicted RBP6.82□□□□□ -1.32
SCLT1-207ENST00000506233 TSPAN6O43657 245 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 IDH1O75874 414 aaKnown RBP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 MCM5P33992 734 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 NXPE4Q6UWF7 544 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 TMEM139Q8IV31 216 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 PLCD4Q9BRC7 762 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 ATP6V0A2Q9Y487 856 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 DDX49Q9Y6V7 483 aaKnown RBP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 MCCP23508 829 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 GDF10P55107 478 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 ANKRD1Q15327 319 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 TRAPPC3LQ5T215 181 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 RESP18Q5W5W9 173 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 KIAA0825Q8IV33 1275 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 NCOA7Q8NI08 942 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 FEZ1Q99689 392 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 ENAMQ9NRM1 1142 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 TNKSO95271 1327 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 SHTN1A0MZ66 631 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 PRPF3O43395 683 aaKnown RBP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 RCAN1P53805 252 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 GUCY1B3Q02153 619 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 FBXL19Q6PCT2 694 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 KLRG1Q96E93 195 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 AATFQ9NY61 560 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 SFMBT1Q9UHJ3 866 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
SCLT1-207ENST00000506233 PPT2Q9UMR5 302 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 SMC3Q9UQE7 1217 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 SLC4A4Q9Y6R1 1079 aa6.81□□□□□ -1.32
SCLT1-207ENST00000506233 MINDY4BA8MYZ0 360 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 ZNF213O14771 459 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 PPP1R12BO60237 982 aaPredicted RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SHMT1P34896 483 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SOX9P48436 509 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 TTC39BQ5VTQ0 682 aaPredicted RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 CLIC6Q96NY7 704 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 APBA2Q99767 749 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 DACT1Q9NYF0 836 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 GOLGA6L3A6NEY3 463 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 PRDM1O75626 825 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 ZKSCAN1P17029 563 aaPredicted RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 KRT40Q6A162 431 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 KANK3Q6NY19 840 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SHDQ96IW2 340 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 ARNT2Q9HBZ2 717 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 NRBP1Q9UHY1 535 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 DAGLAQ9Y4D2 1042 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 XDHP47989 1333 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SMAD7O15105 426 aaKnown RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 FIBPO43427 364 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 NFIAQ12857 509 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SLC39A14Q15043 492 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms