RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 PDCD2LQ9BRP1 358 aa9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 KCNMB3Q9NPA1 279 aa9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.88
CDC42SE2-208ENST00000505065 CST5P28325 142 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 PSMC4P43686 418 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 TRAPPC10P48553 1259 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 MNX1P50219 401 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 TOB1P50616 345 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 ADCY7P51828 1080 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 KRT40Q6A162 431 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 RNF207Q6ZRF8 634 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 BLIDQ8IZY5 108 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 SMCR8Q8TEV9 937 aaPredicted RBP9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 PRKCZQ05513 592 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 ETNPPLQ8TBG4 499 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 ALG1Q9BT22 464 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 PTPRSQ13332 1948 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 SPATA31C2B4DYI2 1134 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 ATG7O95352 703 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 HOXC8P31273 242 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 CTU1Q7Z7A3 348 aaKnown RBP9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
CDC42SE2-208ENST00000505065 IGKV6D-21A0A0A0MT36 114 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 SMCO2A6NFE2 343 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 GCOM1H8Y6P7 765 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 MEIS1O00470 390 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 DHX15O43143 795 aaKnown RBP9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 ADCY6O43306 1168 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 POLR2MP0CAP2 368 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 GNA11P29992 359 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 STK3Q13188 491 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 BAATQ14032 418 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 CPLX2Q6PUV4 134 aaKnown RBP9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 VPS54Q9P1Q0 977 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 FBXO46Q6PJ61 603 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 TAAR1Q96RJ0 339 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 NUDT12Q9BQG2 462 aa9.51□□□□□ -0.89
CDC42SE2-208ENST00000505065 WNT7AO00755 349 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 SYT1P21579 422 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 CNTN2Q02246 1040 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 LHX8Q68G74 356 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 C6orf50Q9HD87 102 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 TBX3O15119 743 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 MAFGO15525 162 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 MRPL12P52815 198 aaKnown RBP9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 KLHDC9Q8NEP7 349 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 SLC5A5Q92911 643 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 ANO3Q9BYT9 981 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 JADE2Q9NQC1 790 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 PDCD11Q14690 1871 aaKnown RBP9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 ASB14A6NK59 587 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 ALAS1P13196 640 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 KCNA2P16389 499 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 GJB4Q9NTQ9 266 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
CDC42SE2-208ENST00000505065 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 KRT2P35908 639 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 SLC26A4O43511 780 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 HMGCRP04035 888 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 TGFB3P10600 412 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 ITGB5P18084 799 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 FLT3LGP49771 235 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 NAPAP54920 295 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 PTPAQ15257 358 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 HEATR3Q7Z4Q2 680 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 NOSTRINQ8IVI9 506 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 PAGR1Q9BTK6 254 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 EIF3JO75822 258 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 HOXD10P28358 340 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 ARHGEF6Q15052 776 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 CCL14Q16627 93 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 ARMCX2Q7L311 632 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 BRAPQ7Z569 592 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 REXO1Q8N1G1 1221 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 PURBQ96QR8 312 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 TMEM260Q9NX78 707 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 ADD3Q9UEY8 706 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 FAM86B1E9PN63 330 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 FAM86B2P0C5J1 330 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 GCFC2P16383 781 aaKnown RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 NASPP49321 788 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 LBX1P52954 281 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 USH1GQ495M9 461 aa9.49□□□□□ -0.89
CDC42SE2-208ENST00000505065 ATL3Q6DD88 541 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms