RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.22□□□□□ -1.25
GYPB-204ENST00000504951 VTA1Q9NP79 307 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 FEM1BQ9UK73 627 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
GYPB-204ENST00000504951 PROB1E7EW31 1015 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.26
GYPB-204ENST00000504951 IPO8O15397 1037 aaKnown RBP7.21□□□□□ -1.26
GYPB-204ENST00000504951 DYNC1LI2O43237 492 aaPredicted RBP7.21□□□□□ -1.26
GYPB-204ENST00000504951 PDE6AP16499 860 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 PURAQ00577 322 aaKnown RBP7.21□□□□□ -1.26
GYPB-204ENST00000504951 ZP2Q05996 745 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 FAM83BQ5T0W9 1011 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 SLC9C2Q5TAH2 1124 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 HFE2Q6ZVN8 426 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 ERMP1Q7Z2K6 904 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 SESTD1Q86VW0 696 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 TMEM57Q8N5G2 664 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 RETREG2Q8NC44 543 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 AFAP1L1Q8TED9 768 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 FRAT1Q92837 279 aaPredicted RBP7.21□□□□□ -1.26
GYPB-204ENST00000504951 MTG1Q9BT17 334 aaPredicted RBP7.21□□□□□ -1.26
GYPB-204ENST00000504951 MAF1Q9H063 256 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 ANTXR1Q9H6X2 564 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 CERS4Q9HA82 394 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 ZNF536O15090 1300 aa7.21□□□□□ -1.26
GYPB-204ENST00000504951 SCN10AQ9Y5Y9 1956 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 CACNA1HO95180 2353 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 ZDBF2Q9HCK1 2354 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 IGKV6D-41A0A0C4DH26 115 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 A6NJR5 290 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 MAP3K7O43318 606 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 SURF6O75683 361 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 NDUFB10O96000 172 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 IL9P15248 144 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 KCNA5P22460 613 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 KCNJ6P48051 423 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 CPT1AP50416 773 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 WDR5P61964 334 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 CNTN2Q02246 1040 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 NBR1Q14596 966 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 GPNMBQ14956 572 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 SMAD2Q15796 467 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 PTPROQ16827 1216 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 CTC1Q2NKJ3 1217 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 SBK1Q52WX2 424 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 CNKSR3Q6P9H4 555 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 GIMAP6Q6P9H5 292 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 AMOTL1Q8IY63 956 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 GMCL1P1Q8NEA9 526 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 DDX12PQ92771 950 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 EDAQ92838 391 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 PABPC5Q96DU9 382 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 MRPL38Q96DV4 380 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 DYNLL2Q96FJ2 89 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 ACAD9Q9H845 621 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 TRMT13Q9NUP7 481 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 TLR7Q9NYK1 1049 aaKnown RBP7.2□□□□□ -1.26
GYPB-204ENST00000504951 CACNA1AO00555 2505 aa7.2□□□□□ -1.26
GYPB-204ENST00000504951 PTPRZ1P23471 2315 aaPredicted RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 TET1Q8NFU7 2136 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 MCM3APO60318 1980 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 LINC01553A4QN01 128 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 CYP2D6P10635 497 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 CYP2C9P11712 490 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 HTRA4P83105 476 aaPredicted RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 UBE3CQ15386 1083 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 TIGD5Q53EQ6 642 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 BRDTQ58F21 947 aaPredicted RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 DEFB128Q7Z7B8 93 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 FAM160B2Q86V87 743 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 ERC1Q8IUD2 1116 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 LCORLQ8N3X6 602 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 CHURC1Q8WUH1 139 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 SDR42E1Q8WUS8 393 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 UIMC1Q96RL1 719 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 CCDC8Q9H0W5 538 aaPredicted RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 ALG13Q9NP73 1137 aaKnown RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 A1CFQ9NQ94 594 aaKnown RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 INSL6Q9Y581 213 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 ZNF532Q9HCE3 1301 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 TECTAO75443 2155 aa7.19□□□□□ -1.26
GYPB-204ENST00000504951 GREB1LQ9C091 1923 aaPredicted RBP7.19□□□□□ -1.26
GYPB-204ENST00000504951 NAV1Q8NEY1 1877 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 H3BNC9 293 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 RLBP1P12271 317 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 SELPP16109 830 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 IRS1P35568 1242 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 PSMC6P62333 389 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 TCF15Q12870 199 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 CTR9Q6PD62 1173 aa7.18□□□□□ -1.26
GYPB-204ENST00000504951 KIAA1211Q6ZU35 1233 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms