RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PCDHA8Q9Y5H6 950 aa15.22■□□□□ 0.03
PDLIM7-212ENST00000504380 PIK3CDO00329 1044 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 PRMT2P55345 433 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 TRIM29Q14134 588 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 ARHGEF16Q5VV41 709 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 BLIDQ8IZY5 108 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 IL31RAQ8NI17 732 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 PCDHA4Q9UN74 947 aa15.21■□□□□ 0.03
PDLIM7-212ENST00000504380 MCM3APO60318 1980 aa15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 HSP90AA1P07900 732 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 XRCC5P13010 732 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 XBP1P17861 261 aa15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 GNA11P29992 359 aa15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 CLK2P49760 499 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 PKN2Q16513 984 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 EEPD1Q7L9B9 569 aa15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 PXMP2Q9NR77 195 aa15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-212ENST00000504380 SNAI1O95863 264 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 MMP1P03956 469 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 MYCLP12524 364 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 GRK4P32298 578 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 NR5A1Q13285 461 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 BECN1Q14457 450 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 FBXO46Q6PJ61 603 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 ARMCX2Q7L311 632 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 REXO1Q8N1G1 1221 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 NSUN6Q8TEA1 469 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 PDCD2LQ9BRP1 358 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 TINF2Q9BSI4 451 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 ANO3Q9BYT9 981 aa15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 MAP3K20Q9NYL2 800 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 ADD3Q9UEY8 706 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-212ENST00000504380 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 SPDYE3A6NKU9 549 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 BTBD18B2RXH4 712 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 M0R2N6 131 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 IGHA2P01877 340 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 INHAP05111 366 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 NR3C2P08235 984 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 KRT2P35908 639 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 CACNB2Q08289 660 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 PGM5Q15124 567 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 OLFML2BQ68BL8 750 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 ZNF467Q7Z7K2 595 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 DIS3L2Q8IYB7 885 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 DNERQ8NFT8 737 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-212ENST00000504380 RPTORQ8N122 1335 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 ASB14A6NK59 587 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 PDE4DQ08499 809 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 SLC9C1Q4G0N8 1177 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 MAMDC4Q6UXC1 1216 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 BICD2Q8TD16 824 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 PXYLP1Q8TE99 480 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 MAF1Q9H063 256 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 PDGFCQ9NRA1 345 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 RTEL1Q9NZ71 1219 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
PDLIM7-212ENST00000504380 H3BQV1 296 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 EDIL3O43854 480 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 FOSP01100 380 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 HMGCRP04035 888 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 PTGS1P23219 599 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 EDNRBP24530 442 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 AP3B2Q13367 1082 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 TMEM63BQ5T3F8 832 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 GALNT17Q6IS24 598 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 MORC4Q8TE76 937 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
PDLIM7-212ENST00000504380 LRRC37A2A6NM11 1700 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 VPS37CA5D8V6 355 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 SYT1P21579 422 aa15.15■□□□□ 0.02
PDLIM7-212ENST00000504380 CCND2P30279 289 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms