RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CDH23Q9H251 3354 aa25.16■■□□□ 1.62
RNF4-205ENST00000504224 SLC28A3Q9HAS3 691 aa25.16■■□□□ 1.62
RNF4-205ENST00000504224 DHX16O60231 1041 aaKnown RBP25.15■■□□□ 1.62
RNF4-205ENST00000504224 IGHDP01880 384 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 RABGGTBP53611 331 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 NUCB1Q02818 461 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 NBPF20Q3BBV1 942 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 DEFB128Q7Z7B8 93 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 OSBPL3Q9H4L5 887 aa25.15■■□□□ 1.62
RNF4-205ENST00000504224 YBX2Q9Y2T7 364 aaKnown RBP25.15■■□□□ 1.62
RNF4-205ENST00000504224 PRUNE2Q8WUY3 3088 aa25.14■■□□□ 1.62
RNF4-205ENST00000504224 KPNA6O60684 536 aa25.14■■□□□ 1.62
RNF4-205ENST00000504224 IGFBP4P22692 258 aa25.14■■□□□ 1.62
RNF4-205ENST00000504224 TTLL4Q14679 1199 aa25.14■■□□□ 1.62
RNF4-205ENST00000504224 SYMPKQ92797 1274 aaKnown RBP25.14■■□□□ 1.62
RNF4-205ENST00000504224 ZSCAN10Q96SZ4 725 aaPredicted RBP25.14■■□□□ 1.62
RNF4-205ENST00000504224 HIP1O00291 1037 aa25.13■■□□□ 1.61
RNF4-205ENST00000504224 IRX6P78412 446 aaPredicted RBP25.13■■□□□ 1.61
RNF4-205ENST00000504224 ADGRF4Q8IZF3 695 aa25.13■■□□□ 1.61
RNF4-205ENST00000504224 RGS22Q8NE09 1264 aa25.13■■□□□ 1.61
RNF4-205ENST00000504224 TBC1D5Q92609 795 aa25.13■■□□□ 1.61
RNF4-205ENST00000504224 PRDM6Q9NQX0 595 aa25.13■■□□□ 1.61
RNF4-205ENST00000504224 ABCB11O95342 1321 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 A6NJR5 290 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 NT5C2P49902 561 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 IMMTQ16891 758 aaKnown RBP25.12■■□□□ 1.61
RNF4-205ENST00000504224 ASPRV1Q53RT3 343 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 SEPT14Q6ZU15 432 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 VAT1LQ9HCJ6 419 aa25.12■■□□□ 1.61
RNF4-205ENST00000504224 ARIH2O95376 493 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 PFKMP08237 780 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 ATP2A2P16615 1042 aaKnown RBP25.11■■□□□ 1.61
RNF4-205ENST00000504224 ADGRE1Q14246 886 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 CCDC85BQ15834 202 aaPredicted RBP25.11■■□□□ 1.61
RNF4-205ENST00000504224 NFRKBQ6P4R8 1299 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 ENAHQ8N8S7 591 aaPredicted RBP25.11■■□□□ 1.61
RNF4-205ENST00000504224 RETREG2Q8NC44 543 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 SYTL5Q8TDW5 730 aaPredicted RBP25.11■■□□□ 1.61
RNF4-205ENST00000504224 TAAR1Q96RJ0 339 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 DSCC1Q9BVC3 393 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 ZSWIM5Q9P217 1185 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 CTNNA3Q9UI47 895 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 NOD1Q9Y239 953 aa25.11■■□□□ 1.61
RNF4-205ENST00000504224 PARP1P09874 1014 aaKnown RBP25.1■■□□□ 1.61
RNF4-205ENST00000504224 MYOGP15173 224 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 TJAP1Q5JTD0 557 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 PPP2R2DQ66LE6 453 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 MCF2L2Q86YR7 1114 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 ANKS1AQ92625 1134 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 VWCEQ96DN2 955 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 UBAC1Q9BSL1 405 aa25.1■■□□□ 1.61
RNF4-205ENST00000504224 QRICH1Q2TAL8 776 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 CHST3Q7LGC8 479 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 FBXO11Q86XK2 927 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 NSUN6Q8TEA1 469 aaKnown RBP25.09■■□□□ 1.61
RNF4-205ENST00000504224 AFG1LQ8WV93 481 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 RMDN3Q96TC7 470 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 KRT23Q9C075 422 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 COL20A1Q9P218 1284 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 MRPL11Q9Y3B7 192 aaKnown RBP25.09■■□□□ 1.61
RNF4-205ENST00000504224 PCDHA11Q9Y5I1 949 aa25.09■■□□□ 1.61
RNF4-205ENST00000504224 GH1P01241 217 aa25.08■■□□□ 1.61
RNF4-205ENST00000504224 ACTN1P12814 892 aa25.08■■□□□ 1.61
RNF4-205ENST00000504224 PTPN11Q06124 597 aaPredicted RBP25.08■■□□□ 1.61
RNF4-205ENST00000504224 LY6KQ17RY6 165 aa25.08■■□□□ 1.61
RNF4-205ENST00000504224 FTOQ9C0B1 505 aaKnown RBP eCLIP25.08■■□□□ 1.61
RNF4-205ENST00000504224 RFC2P35250 354 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 STXBP2Q15833 593 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 IFIT1BQ5T764 474 aaKnown RBP25.07■■□□□ 1.6
RNF4-205ENST00000504224 ARHGEF16Q5VV41 709 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 CCDC62Q6P9F0 684 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 MAF1Q9H063 256 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 CNNM2Q9H8M5 875 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 JMJD4Q9H9V9 463 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 LAMA4Q16363 1823 aa25.07■■□□□ 1.6
RNF4-205ENST00000504224 MMP3P08254 477 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 IQCF3P0C7M6 154 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 EIF2AK2P19525 551 aaKnown RBP25.06■■□□□ 1.6
RNF4-205ENST00000504224 BFSP2Q13515 415 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 MICALL1Q8N3F8 863 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 IWS1Q96ST2 819 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 THEGQ9P2T0 379 aa25.06■■□□□ 1.6
RNF4-205ENST00000504224 PITPNM1O00562 1244 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 CFBP00751 764 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 ARHGAP1Q07960 439 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 PTGISQ16647 500 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 TMEM67Q5HYA8 995 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 SCN10AQ9Y5Y9 1956 aa25.05■■□□□ 1.6
RNF4-205ENST00000504224 STAG2Q8N3U4 1231 aa25.04■■□□□ 1.6
RNF4-205ENST00000504224 GBF1Q92538 1859 aa25.04■■□□□ 1.6
RNF4-205ENST00000504224 VCANP13611 3396 aa25.04■■□□□ 1.6
RNF4-205ENST00000504224 CASTP20810 708 aaKnown RBP25.03■■□□□ 1.6
RNF4-205ENST00000504224 CCDC155Q8N6L0 562 aa25.03■■□□□ 1.6
RNF4-205ENST00000504224 ATXN2LQ8WWM7 1075 aaKnown RBP25.03■■□□□ 1.6
RNF4-205ENST00000504224 AMNQ9BXJ7 453 aa25.03■■□□□ 1.6
RNF4-205ENST00000504224 CHD9Q3L8U1 2897 aa25.03■■□□□ 1.6
RNF4-205ENST00000504224 KLRF2D3W0D1 207 aa25.02■■□□□ 1.6
RNF4-205ENST00000504224 CA3P07451 260 aa25.02■■□□□ 1.6
RNF4-205ENST00000504224 GDF6Q6KF10 455 aaPredicted RBP25.02■■□□□ 1.6
RNF4-205ENST00000504224 SLC9A7Q96T83 725 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms