RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZFHX4Q86UP3 3567 aa15.06■□□□□ 0
LSM6-204ENST00000504181 CXCL10P02778 98 aa15.06■□□□□ 0
LSM6-204ENST00000504181 SELPP16109 830 aa15.06■□□□□ 0
LSM6-204ENST00000504181 PTPN11Q06124 597 aaPredicted RBP15.06■□□□□ 0
LSM6-204ENST00000504181 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
LSM6-204ENST00000504181 IKBKEQ14164 716 aa15.06■□□□□ 0
LSM6-204ENST00000504181 CTC1Q2NKJ3 1217 aa15.06■□□□□ 0
LSM6-204ENST00000504181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.06■□□□□ 0
LSM6-204ENST00000504181 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
LSM6-204ENST00000504181 MRS2Q9HD23 443 aa15.06■□□□□ 0
LSM6-204ENST00000504181 RNF146Q9NTX7 359 aa15.06■□□□□ 0
LSM6-204ENST00000504181 TPRP12270 2363 aaKnown RBP15.06■□□□□ 0
LSM6-204ENST00000504181 FRYLO94915 3013 aa15.06■□□□□ 0
LSM6-204ENST00000504181 NCOR2Q9Y618 2525 aa15.05■□□□□ 0
LSM6-204ENST00000504181 EFCAB14O75071 495 aa15.05■□□□□ -0
LSM6-204ENST00000504181 TBX10O75333 385 aa15.05■□□□□ -0
LSM6-204ENST00000504181 NBL1P41271 181 aa15.05■□□□□ -0
LSM6-204ENST00000504181 OAZ1P54368 228 aa15.05■□□□□ -0
LSM6-204ENST00000504181 HYAL1Q12794 435 aa15.05■□□□□ -0
LSM6-204ENST00000504181 TMED8Q6PL24 325 aaPredicted RBP15.05■□□□□ -0
LSM6-204ENST00000504181 C16orf86Q6ZW13 317 aa15.05■□□□□ -0
LSM6-204ENST00000504181 MYOCDQ8IZQ8 938 aa15.05■□□□□ -0
LSM6-204ENST00000504181 ADSSL1Q8N142 457 aa15.05■□□□□ -0
LSM6-204ENST00000504181 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
LSM6-204ENST00000504181 ASIC4Q96FT7 647 aa15.05■□□□□ -0
LSM6-204ENST00000504181 API5Q9BZZ5 524 aaKnown RBP15.05■□□□□ -0
LSM6-204ENST00000504181 ARMT1Q9H993 441 aa15.05■□□□□ -0
LSM6-204ENST00000504181 CD207Q9UJ71 328 aa15.05■□□□□ -0
LSM6-204ENST00000504181 ZNF532Q9HCE3 1301 aa15.04■□□□□ -0
LSM6-204ENST00000504181 LINC01565O15544 149 aa15.04■□□□□ -0
LSM6-204ENST00000504181 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
LSM6-204ENST00000504181 NCK2O43639 380 aa15.04■□□□□ -0
LSM6-204ENST00000504181 PRKAB2O43741 272 aa15.04■□□□□ -0
LSM6-204ENST00000504181 PDE6AP16499 860 aa15.04■□□□□ -0
LSM6-204ENST00000504181 GTF2F1P35269 517 aaKnown RBP eCLIP15.04■□□□□ -0
LSM6-204ENST00000504181 HTRA4P83105 476 aaPredicted RBP15.04■□□□□ -0
LSM6-204ENST00000504181 SLC9C2Q5TAH2 1124 aa15.04■□□□□ -0
LSM6-204ENST00000504181 C12orf60Q5U649 245 aa15.04■□□□□ -0
LSM6-204ENST00000504181 TMEM192Q8IY95 271 aa15.04■□□□□ -0
LSM6-204ENST00000504181 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
LSM6-204ENST00000504181 CNTNAP3BQ96NU0 1288 aa15.04■□□□□ -0
LSM6-204ENST00000504181 PURBQ96QR8 312 aaKnown RBP15.04■□□□□ -0
LSM6-204ENST00000504181 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
LSM6-204ENST00000504181 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
LSM6-204ENST00000504181 CNTNAP3Q9BZ76 1288 aa15.04■□□□□ -0
LSM6-204ENST00000504181 IGFLR1Q9H665 355 aa15.04■□□□□ -0
LSM6-204ENST00000504181 LOC730098B7Z3J9 87 aa15.03■□□□□ -0
LSM6-204ENST00000504181 CSPG5O95196 566 aa15.03■□□□□ -0
LSM6-204ENST00000504181 PARNO95453 639 aaKnown RBP15.03■□□□□ -0
LSM6-204ENST00000504181 PDGFBP01127 241 aaPredicted RBP15.03■□□□□ -0
LSM6-204ENST00000504181 CKBP12277 381 aa15.03■□□□□ -0
LSM6-204ENST00000504181 BRDTQ58F21 947 aaPredicted RBP15.03■□□□□ -0
LSM6-204ENST00000504181 GDF6Q6KF10 455 aaPredicted RBP15.03■□□□□ -0
LSM6-204ENST00000504181 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
LSM6-204ENST00000504181 FBXO11Q86XK2 927 aa15.03■□□□□ -0
LSM6-204ENST00000504181 TRERF1Q96PN7 1200 aa15.03■□□□□ -0
LSM6-204ENST00000504181 FEM1BQ9UK73 627 aa15.03■□□□□ -0
LSM6-204ENST00000504181 PLXNA4Q9HCM2 1894 aa15.02■□□□□ -0
LSM6-204ENST00000504181 RAD50Q92878 1312 aa15.02■□□□□ -0
LSM6-204ENST00000504181 AMHP03971 560 aa15.02■□□□□ -0
LSM6-204ENST00000504181 GNAI2P04899 355 aa15.02■□□□□ -0
LSM6-204ENST00000504181 ALAS1P13196 640 aa15.02■□□□□ -0
LSM6-204ENST00000504181 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
LSM6-204ENST00000504181 NKD2Q969F2 451 aaPredicted RBP15.02■□□□□ -0
LSM6-204ENST00000504181 CHD6Q8TD26 2715 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 CFAP47Q6ZTR5 3102 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 MUM1L1Q5H9M0 696 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 DGLUCYQ7Z3D6 616 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 MORC4Q8TE76 937 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 COPS5Q92905 334 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
LSM6-204ENST00000504181 YME1L1Q96TA2 773 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 CYP39A1Q9NYL5 469 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 NYAP2Q9P242 653 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
LSM6-204ENST00000504181 ACACBO00763 2458 aa15.01□□□□□ -0.01
LSM6-204ENST00000504181 MAP1BP46821 2468 aaKnown RBP15.01□□□□□ -0.01
LSM6-204ENST00000504181 TCRBV5S4A2TA0A5A2 114 aa15□□□□□ -0.01
LSM6-204ENST00000504181 KPNA6O60684 536 aa15□□□□□ -0.01
LSM6-204ENST00000504181 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
LSM6-204ENST00000504181 NDUFV1P49821 464 aa15□□□□□ -0.01
LSM6-204ENST00000504181 NUBP1P53384 320 aa15□□□□□ -0.01
LSM6-204ENST00000504181 RBL2Q08999 1139 aa15□□□□□ -0.01
LSM6-204ENST00000504181 NSMFQ6X4W1 530 aa15□□□□□ -0.01
LSM6-204ENST00000504181 RMDN1Q96DB5 314 aa15□□□□□ -0.01
LSM6-204ENST00000504181 CLIP2Q9UDT6 1046 aa15□□□□□ -0.01
LSM6-204ENST00000504181 EP300Q09472 2414 aaPredicted RBP15□□□□□ -0.01
LSM6-204ENST00000504181 A6NJR5 290 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 LGR5O75473 907 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 SURF6O75683 361 aaKnown RBP14.99□□□□□ -0.01
LSM6-204ENST00000504181 UPP2O95045 317 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 MBD4O95243 580 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 CTNNB1P35222 781 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
LSM6-204ENST00000504181 PPP2R5BQ15173 497 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 TKFCQ3LXA3 575 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
LSM6-204ENST00000504181 MSLNLQ96KJ4 702 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms