RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 HSPD1P10809 573 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 PSMA5P28066 241 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 OAS2P29728 719 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ATP2C1P98194 919 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 FMR1Q06787 632 aaKnown RBP eCLIP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CEP85LQ5SZL2 805 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 AMOTL1Q8IY63 956 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SDR16C5Q8N3Y7 309 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SPC24Q8NBT2 197 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CALR3Q96L12 384 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MKNK1Q9BUB5 465 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 COA1Q9GZY4 146 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 QTRT2Q9H974 415 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 ODF2LQ9ULJ1 636 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SOWAHBA6NEL2 793 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC69A6NI79 296 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 TBC1D4O60343 1298 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 TATP17735 454 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 MAGEA8P43361 318 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 TOB1P50616 345 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 GNL2Q13823 731 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 KIAA0753Q2KHM9 967 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SH2D4BQ5SQS7 431 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 DRICH1Q6PGQ1 229 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 UBE3BQ7Z3V4 1068 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 CROCCP2Q86T23 111 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 LRRC15Q8TF66 581 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 HVCN1Q96D96 273 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 SAAL1Q96ER3 474 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 OSER1Q9NX31 292 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 AATFQ9NY61 560 aaKnown RBP eCLIP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 HSFX1Q9UBD0 423 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 NOB1Q9ULX3 412 aaKnown RBP3.13□□□□□ -1.91
NEDD4-204ENST00000503468 EFR3BQ9Y2G0 817 aa3.13□□□□□ -1.91
NEDD4-204ENST00000503468 RASSF10A6NK89 507 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZEB2O60315 1214 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LGR5O75473 907 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 TCEA3O75764 348 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 F13A1P00488 732 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ATP1A3P13637 1013 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 YY1P25490 414 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 EDRF1Q3B7T1 1238 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CC2D1AQ6P1N0 951 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 TLDC1Q6P9B6 456 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 MREGQ8N565 214 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 SNRNP27Q8WVK2 155 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 MAML3Q96JK9 1138 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 INTS13Q9NVM9 706 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 BTBD7Q9P203 1132 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 UBE4BO95155 1302 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 URI1O94763 535 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PTGS1P23219 599 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 DRG2P55039 364 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ADCY2Q08462 1091 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PACS1Q6VY07 963 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 OSBP2Q969R2 916 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 DNAJC19Q96DA6 116 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 RMDN2Q96LZ7 410 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LY9Q9HBG7 655 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PTPRHQ9HD43 1115 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 SUFUQ9UMX1 484 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PCDHA6Q9UN73 950 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZBTB7CA1YPR0 619 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 FIBPO43427 364 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 BUB1BO60566 1050 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 U2AF1L5P0DN76 240 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 U2AF1Q01081 240 aaKnown RBP eCLIP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 SEPT2Q15019 361 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 SLC14A2Q15849 920 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LONRF2Q1L5Z9 754 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ERCC6LQ2NKX8 1250 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC62Q6P9F0 684 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 RPUSD2Q8IZ73 545 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 LINC00301Q8NCQ3 95 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 RTP4Q96DX8 246 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 DRC1Q96MC2 740 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF396Q96N95 335 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 IL17RBQ9NRM6 502 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 TOMM22Q9NS69 142 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 NTNG1Q9Y2I2 539 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 MTCL1Q9Y4B5 1905 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 A0A1W2PQJ5 194 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 STX10O60499 249 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 WISP3O95389 354 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 GCFC2P16383 781 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ATF7P17544 494 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 EIF4BP23588 611 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC178Q5BJE1 867 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 GNASQ5JWF2 1037 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 ZNF530Q6P9A1 599 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC148Q8NFR7 591 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CACTINQ8WUQ7 758 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CCDC47Q96A33 483 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 RUFY1Q96T51 708 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 UPF3BQ9BZI7 483 aaKnown RBP3.12□□□□□ -1.91
NEDD4-204ENST00000503468 KIAA1683Q9H0B3 1180 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 CLSTN2Q9H4D0 955 aa3.12□□□□□ -1.91
NEDD4-204ENST00000503468 DACH1Q9UI36 760 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms