RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PDGFCQ9NRA1 345 aa21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 RBM27Q9P2N5 1060 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-209ENST00000503346 MYH6P13533 1939 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 C11orf97A0A1B0GVM6 126 aaPredicted RBP21■□□□□ 0.95
PDLIM7-209ENST00000503346 RBM47A0AV96 593 aaKnown RBP21■□□□□ 0.95
PDLIM7-209ENST00000503346 MEIS2O14770 477 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 PRPF3O43395 683 aaKnown RBP21■□□□□ 0.95
PDLIM7-209ENST00000503346 ADAMTS4O75173 837 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 EIF2AK2P19525 551 aaKnown RBP21■□□□□ 0.95
PDLIM7-209ENST00000503346 AK2P54819 239 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 TNFAIP2Q03169 654 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 LRRC41Q15345 812 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 PFKFB3Q16875 520 aaPredicted RBP21■□□□□ 0.95
PDLIM7-209ENST00000503346 PPP1R18Q6NYC8 613 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 PDCD2LQ9BRP1 358 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 C22orf23Q9BZE7 217 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 PSTPIP2Q9H939 334 aa21■□□□□ 0.95
PDLIM7-209ENST00000503346 LRRC37A2A6NM11 1700 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 PGK1P00558 417 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 NR3C2P08235 984 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 RBM25P49756 843 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 NKX3-2P78367 333 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 STXBP2Q15833 593 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 TYW1BQ6NUM6 668 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 RNF180Q86T96 592 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 FCHSD1Q86WN1 690 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 TEX2Q8IWB9 1127 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 CUL5Q93034 780 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 RNF26Q9BY78 433 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 UPF3AQ9H1J1 476 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 BARHL2Q9NY43 387 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 TPCN1Q9ULQ1 816 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 GNEQ9Y223 722 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 FRMPD4Q14CM0 1322 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 SYNRGQ9UMZ2 1314 aa20.99■□□□□ 0.95
PDLIM7-209ENST00000503346 KBTBD13C9JR72 458 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 STXBP3O00186 592 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 SCG2P13521 617 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 SMPD1P17405 629 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 NEK4P51957 841 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 GJA9P57773 515 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 USP17L6PQ6QN14 398 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 KLHDC9Q8NEP7 349 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 SMARCC2Q8TAQ2 1214 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 PHKBQ93100 1093 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 HTATIP2Q9BUP3 242 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 Q9Y3F1 56 aa20.98■□□□□ 0.95
PDLIM7-209ENST00000503346 FRMPD3Q5JV73 1810 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 EIF3JO75822 258 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 CST5P28325 142 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 NAPAP54920 295 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 STK3Q13188 491 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 PGM5Q15124 567 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 PKN1Q16512 942 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 DUSP28Q4G0W2 176 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 VSIG10LQ86VR7 867 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 SCFD2Q8WU76 684 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 KIF2CQ99661 725 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 WDR11Q9BZH6 1224 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 MCM3APO60318 1980 aa20.97■□□□□ 0.95
PDLIM7-209ENST00000503346 CPLX1O14810 134 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 PFKFB2O60825 505 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 AKAP17AQ02040 695 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 SCRN1Q12765 414 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 TMEM63BQ5T3F8 832 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 CCSAPQ6IQ19 270 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 CPLX2Q6PUV4 134 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 NOL8Q76FK4 1167 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 IL31RAQ8NI17 732 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 TSEN34Q9BSV6 310 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 SLC26A6Q9BXS9 759 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 SLKQ9H2G2 1235 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 RIC8AQ9NPQ8 531 aa20.96■□□□□ 0.95
PDLIM7-209ENST00000503346 CTAGE5O15320 804 aa20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 CCND2P30279 289 aa20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 TLK2Q86UE8 772 aa20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 GLT8D2Q9H1C3 349 aa20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 PHF24Q9UPV7 400 aa20.95■□□□□ 0.94
PDLIM7-209ENST00000503346 ESYT2A0FGR8 921 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 MYADML2A6NDP7 307 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 NKRFO15226 690 aaKnown RBP eCLIP20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 TNRC18O15417 2968 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 C6orf222P0C671 652 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 MYCLP12524 364 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 CCDC62Q6P9F0 684 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 TRIM22Q8IYM9 498 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 SENP6Q9GZR1 1112 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 AP5M1Q9H0R1 490 aa20.94■□□□□ 0.94
PDLIM7-209ENST00000503346 SMCO2A6NFE2 343 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 MOXD2PA6NHM9 499 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 DYNC1LI2O43237 492 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 RGS20O76081 388 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 PTGS1P23219 599 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 ADCY7P51828 1080 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms