RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TSPY3P0CV98 308 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 TSPY8P0CW00 308 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 EIF4A3P38919 411 aaKnown RBP27.21■■□□□ 1.95
DDX41-202ENST00000503078 NOP2P46087 812 aaKnown RBP27.21■■□□□ 1.95
DDX41-202ENST00000503078 BARGINQ6ZT62 677 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 PPM1EQ8WY54 764 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 HPS3Q969F9 1004 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 LZTS2Q9BRK4 669 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 MTMR7Q9Y216 660 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 EPHB6O15197 1021 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 TECP42680 631 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 DZIP1Q86YF9 867 aaKnown RBP27.21■■□□□ 1.95
DDX41-202ENST00000503078 SLC39A2Q9NP94 309 aa27.21■■□□□ 1.95
DDX41-202ENST00000503078 FAM207AQ9NSI2 230 aaPredicted RBP27.21■■□□□ 1.95
DDX41-202ENST00000503078 NAPAP54920 295 aa27.2■■□□□ 1.95
DDX41-202ENST00000503078 PPFIA1Q13136 1202 aa27.2■■□□□ 1.95
DDX41-202ENST00000503078 MMTAG2Q9BU76 263 aaKnown RBP27.2■■□□□ 1.95
DDX41-202ENST00000503078 ROBO3Q96MS0 1386 aa27.2■■□□□ 1.94
DDX41-202ENST00000503078 AKR1B10O60218 316 aa27.2■■□□□ 1.94
DDX41-202ENST00000503078 IRAK1P51617 712 aa27.2■■□□□ 1.94
DDX41-202ENST00000503078 TTC31Q49AM3 519 aaPredicted RBP27.2■■□□□ 1.94
DDX41-202ENST00000503078 NFRKBQ6P4R8 1299 aa27.2■■□□□ 1.94
DDX41-202ENST00000503078 RRP36Q96EU6 259 aaKnown RBP27.2■■□□□ 1.94
DDX41-202ENST00000503078 CALML4Q96GE6 196 aa27.2■■□□□ 1.94
DDX41-202ENST00000503078 GOLGA8KD6RF30 607 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 ANKRD65E5RJM6 399 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 RPS8P62241 208 aaKnown RBP27.19■■□□□ 1.94
DDX41-202ENST00000503078 MAN2A1Q16706 1144 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 NEK8Q86SG6 692 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 CCDC84Q86UT8 332 aaPredicted RBP27.19■■□□□ 1.94
DDX41-202ENST00000503078 EFCAB13Q8IY85 973 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 SH3GL2Q99962 352 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 TMEM47Q9BQJ4 181 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 ABCB11O95342 1321 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 SPTY2D1Q68D10 685 aaPredicted RBP27.19■■□□□ 1.94
DDX41-202ENST00000503078 MMRN2Q9H8L6 949 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 JAG2Q9Y219 1238 aa27.19■■□□□ 1.94
DDX41-202ENST00000503078 EPHB4P54760 987 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 CCDC181Q5TID7 509 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 PACS2Q86VP3 889 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 ZNF444Q8N0Y2 327 aaPredicted RBP27.18■■□□□ 1.94
DDX41-202ENST00000503078 ANKRD2Q9GZV1 360 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 C6orf50Q9HD87 102 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 STX8Q9UNK0 236 aa27.18■■□□□ 1.94
DDX41-202ENST00000503078 KLRF2D3W0D1 207 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 GOLGA8HP0CJ92 632 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 MATR3P43243 847 aaKnown RBP eCLIP27.17■■□□□ 1.94
DDX41-202ENST00000503078 EMBQ6PCB8 327 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 GBP6Q6ZN66 633 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 SV2BQ7L1I2 683 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 SPZ1Q9BXG8 430 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 STIM2Q9P246 746 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 SMCO2A6NFE2 343 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 LRRC53A6NM62 1247 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 PJA2O43164 708 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 OPA1O60313 960 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 GNA11P29992 359 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 MAGEA1P43355 309 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 SLC7A5Q01650 507 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 SLC10A5Q5PT55 438 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 RRAGAQ7L523 313 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 CAPS2Q9BXY5 557 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 FAM107BQ9H098 131 aa27.17■■□□□ 1.94
DDX41-202ENST00000503078 FGFR1OPO95684 399 aaKnown RBP27.16■■□□□ 1.94
DDX41-202ENST00000503078 PAFAH1B1P43034 410 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 HAUS3Q68CZ6 603 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 UNC13DQ70J99 1090 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 MYH10P35580 1976 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 CXCR5P32302 372 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 PSMB7Q99436 277 aa27.16■■□□□ 1.94
DDX41-202ENST00000503078 PVALEFA0A1B0GWK0 134 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 TNFRSF8P28908 595 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 SKIDA1Q1XH10 827 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 SH3RF3Q8TEJ3 882 aaPredicted RBP27.15■■□□□ 1.94
DDX41-202ENST00000503078 MRPS25P82663 173 aaKnown RBP27.15■■□□□ 1.94
DDX41-202ENST00000503078 ORC2Q13416 577 aaPredicted RBP27.15■■□□□ 1.94
DDX41-202ENST00000503078 ALS2CLQ60I27 953 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 GUF1Q8N442 669 aaKnown RBP27.15■■□□□ 1.94
DDX41-202ENST00000503078 CCDC155Q8N6L0 562 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 BAP1Q92560 729 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 CPVLQ9H3G5 476 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 SMARCAL1Q9NZC9 954 aa27.15■■□□□ 1.94
DDX41-202ENST00000503078 MYMKA6NI61 221 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 EPB41P11171 864 aaKnown RBP27.14■■□□□ 1.94
DDX41-202ENST00000503078 GRB10Q13322 594 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 BICDL1Q6ZP65 573 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 SLC44A5Q8NCS7 719 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 TBCKQ8TEA7 893 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 CAVIN3Q969G5 261 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 BLOC1S4Q9NUP1 217 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 EHD2Q9NZN4 543 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 STK17AQ9UEE5 414 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 SALL4Q9UJQ4 1053 aa27.14■■□□□ 1.94
DDX41-202ENST00000503078 A0A087WUV0 522 aaPredicted RBP27.13■■□□□ 1.93
DDX41-202ENST00000503078 NCK2O43639 380 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 CCT5P48643 541 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 LRRC63Q05C16 580 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 ASTE1Q2TB18 679 aaPredicted RBP27.13■■□□□ 1.93
DDX41-202ENST00000503078 SOGA3Q5TF21 947 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 TXNRD3Q86VQ6 643 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms