RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ANKRD27Q96NW4 1050 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 SMC6Q96SB8 1091 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 NSRP1Q9H0G5 558 aaKnown RBP7.21□□□□□ -1.26
CLCN3-203ENST00000502998 GGNBP2Q9H3C7 697 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 SLC39A2Q9NP94 309 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 DDX21Q9NR30 783 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLCN3-203ENST00000502998 AATFQ9NY61 560 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLCN3-203ENST00000502998 CCPG1Q9ULG6 757 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 EXOC6BQ9Y2D4 811 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 SH3GLB1Q9Y371 365 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 MRPL11Q9Y3B7 192 aaKnown RBP7.21□□□□□ -1.26
CLCN3-203ENST00000502998 TIMM22Q9Y584 194 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 KIF7Q2M1P5 1343 aa7.21□□□□□ -1.26
CLCN3-203ENST00000502998 RTL1A6NKG5 1358 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 KIF20BQ96Q89 1820 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 GOLGA6L7A0A1B0GV03 622 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 SRGAP3O43295 1099 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ZSCAN12O43309 604 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ACTN4O43707 911 aaKnown RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ZNF254O75437 659 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 DNAJC8O75937 253 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ADCY5O95622 1261 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 GNAT1P11488 350 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 IDEP14735 1019 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 POLR2EP19388 210 aaKnown RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 CASTP20810 708 aaKnown RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 HSPA4P34932 840 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 GNL1P36915 607 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 USP5P45974 858 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 SNX16P57768 344 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 AMPD3Q01432 767 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 UBE4AQ14139 1066 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ACAP1Q15027 740 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 BEND6Q5SZJ8 279 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 ALKBH2Q6NS38 261 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 B4GALNT4Q76KP1 1039 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 SESTD1Q86VW0 696 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 GRAMD2AQ8IUY3 354 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 TEX9Q8N6V9 391 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 DEPTORQ8TB45 409 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 TBC1D20Q96BZ9 403 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 CFAP36Q96G28 342 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 RPGRIP1Q96KN7 1286 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 AASDHPPTQ9NRN7 309 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 KCND1Q9NSA2 647 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 KLC4Q9NSK0 619 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 LMBRD1Q9NUN5 540 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 TYW1Q9NV66 732 aaKnown RBP7.2□□□□□ -1.26
CLCN3-203ENST00000502998 GALNT8Q9NY28 637 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 STAP2Q9UGK3 403 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 HDAC9Q9UKV0 1011 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 MTUS1Q9ULD2 1270 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 TRAF3IP3Q9Y228 551 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 COL24A1Q17RW2 1714 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 DOT1LQ8TEK3 1739 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 MEGF6O75095 1541 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 INSRP06213 1382 aa7.2□□□□□ -1.26
CLCN3-203ENST00000502998 A6NHS1 94 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 A6NNZ2 444 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 MUSKO15146 869 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TEX28O15482 410 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 NDUFB5O43674 189 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 S100A6P06703 90 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 WEE1P30291 646 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 ETV3P41162 512 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 GNAQP50148 359 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 KCNQ4P56696 695 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 GJA9P57773 515 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 LMNB2Q03252 620 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 BYSLQ13895 437 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 LBRQ14739 615 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 BCL2A1Q16548 175 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 WHAMMP3Q1A5X7 153 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TUBB8Q3ZCM7 444 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 ARSIQ5FYB1 569 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 SPATA1Q5VX52 437 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 LMBRD2Q68DH5 695 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 NEPROQ6NW34 567 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 DGLUCYQ7Z3D6 616 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 MAATS1Q7Z4T9 603 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 CRACR2BQ8N4Y2 399 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TMCO5AQ8N6Q1 288 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TRIML2Q8N7C3 387 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 GALNT6Q8NCL4 622 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 RPGRQ92834 1020 aaKnown RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 SDCCAG3Q96C92 435 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 SNF8Q96H20 258 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TMEM87BQ96K49 555 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TCF12Q99081 682 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 CARD14Q9BXL6 1004 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 OSBPL5Q9H0X9 879 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-203ENST00000502998 VCPKMTQ9H867 229 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 L2HGDHQ9H9P8 463 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 PARVBQ9HBI1 364 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 TCP11L1Q9NUJ3 509 aa7.19□□□□□ -1.26
CLCN3-203ENST00000502998 KCTD5Q9NXV2 234 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms