RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 MTG1Q9BT17 334 aaPredicted RBP20.27■□□□□ 0.84
HDAC11-220ENST00000498532 MTIF3Q9H2K0 278 aaKnown RBP20.27■□□□□ 0.84
HDAC11-220ENST00000498532 VCANP13611 3396 aa20.27■□□□□ 0.84
HDAC11-220ENST00000498532 SUPT20HL2P0C7V6 817 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 CCL23P55773 120 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 TRDNQ13061 729 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 FBXO11Q86XK2 927 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
HDAC11-220ENST00000498532 RUFY2Q8WXA3 655 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 TIFAQ96CG3 184 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 VAT1LQ9HCJ6 419 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 PRUNE2Q8WUY3 3088 aa20.26■□□□□ 0.83
HDAC11-220ENST00000498532 SCN10AQ9Y5Y9 1956 aa20.25■□□□□ 0.83
HDAC11-220ENST00000498532 A6NJR5 290 aa20.25■□□□□ 0.83
HDAC11-220ENST00000498532 FAM47CQ5HY64 1035 aa20.25■□□□□ 0.83
HDAC11-220ENST00000498532 NSUN6Q8TEA1 469 aaKnown RBP20.25■□□□□ 0.83
HDAC11-220ENST00000498532 COPS5Q92905 334 aa20.25■□□□□ 0.83
HDAC11-220ENST00000498532 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
HDAC11-220ENST00000498532 TRMT13Q9NUP7 481 aaKnown RBP20.25■□□□□ 0.83
HDAC11-220ENST00000498532 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
HDAC11-220ENST00000498532 KPNA6O60684 536 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 FGBP02675 491 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 SEC23AQ15436 765 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 HERVK_113Q902F9 699 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 TBC1D5Q92609 795 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 RMDN3Q96TC7 470 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 PBX4Q9BYU1 374 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 ZNF576Q9H609 170 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 COL20A1Q9P218 1284 aa20.24■□□□□ 0.83
HDAC11-220ENST00000498532 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 KLRF2D3W0D1 207 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 ARIH2O95376 493 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-220ENST00000498532 GRIN2CQ14957 1233 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 CYB5R4Q7L1T6 521 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 STAG2Q8N3U4 1231 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 TAAR1Q96RJ0 339 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 IWS1Q96ST2 819 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 CXXC1Q9P0U4 656 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-220ENST00000498532 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-220ENST00000498532 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
HDAC11-220ENST00000498532 CYP21A2P08686 494 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 CYP2C9P11712 490 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 CHMLP26374 656 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 PBX2P40425 430 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 STXBP2Q15833 593 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 NBPF20Q3BBV1 942 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 ARHGEF16Q5VV41 709 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 NFRKBQ6P4R8 1299 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 SEPT14Q6ZU15 432 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 OTOP2Q7RTS6 562 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 RPUSD2Q8IZ73 545 aaKnown RBP20.22■□□□□ 0.83
HDAC11-220ENST00000498532 SCLYQ96I15 445 aa20.22■□□□□ 0.83
HDAC11-220ENST00000498532 CHD9Q3L8U1 2897 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 ERICH2A1L162 156 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 CFBP00751 764 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 GH1P01241 217 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 EIF2AK2P19525 551 aaKnown RBP20.21■□□□□ 0.83
HDAC11-220ENST00000498532 RAB30Q15771 203 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 CCDC62Q6P9F0 684 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
HDAC11-220ENST00000498532 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
HDAC11-220ENST00000498532 GBF1Q92538 1859 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 TANC1Q9C0D5 1861 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
HDAC11-220ENST00000498532 ZBTB5O15062 677 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 PFKMP08237 780 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 CHMP4BP1P59074 171 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 PTH1RQ03431 593 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 PPP1R13LQ8WUF5 828 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 PXMP2Q9NR77 195 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 MSRAQ9UJ68 235 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 NOD1Q9Y239 953 aa20.2■□□□□ 0.82
HDAC11-220ENST00000498532 PALM3A6NDB9 673 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-220ENST00000498532 MMP3P08254 477 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 HSD17B4P51659 736 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 PTPN11Q06124 597 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-220ENST00000498532 ARHGAP1Q07960 439 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 SART3Q15020 963 aaKnown RBP20.19■□□□□ 0.82
HDAC11-220ENST00000498532 CHST3Q7LGC8 479 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 HOMER1Q86YM7 354 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 AFG1LQ8WV93 481 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 PCDHA1Q9Y5I3 950 aa20.19■□□□□ 0.82
HDAC11-220ENST00000498532 ZBBXA8MT70 800 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 OPLAHO14841 1288 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 SGSM2O43147 1006 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
HDAC11-220ENST00000498532 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
HDAC11-220ENST00000498532 NR3C2P08235 984 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 GHRHRQ02643 423 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 GRM4Q14833 912 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 NCOA7Q8NI08 942 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 MTMR8Q96EF0 704 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 SLC4A7Q9Y6M7 1214 aa20.18■□□□□ 0.82
HDAC11-220ENST00000498532 E7EWF7 191 aa20.17■□□□□ 0.82
HDAC11-220ENST00000498532 PITPNM1O00562 1244 aa20.17■□□□□ 0.82
HDAC11-220ENST00000498532 TRAF1Q13077 416 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms