RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PPP2CBP62714 309 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MAP4K2Q12851 820 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ILF3Q12906 894 aaKnown RBP eCLIP1.67□□□□□ -2.14
XRN1-214ENST00000498077 CSTF3Q12996 717 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 LAPTM5Q13571 262 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 AMOTQ4VCS5 1084 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CIAPIN1Q6FI81 312 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SLC26A9Q7LBE3 791 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ZSCAN30Q86W11 494 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 RNF135Q8IUD6 432 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MEIOBQ8N635 442 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 RASGEF1AQ8N9B8 481 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 RETREG2Q8NC44 543 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.67□□□□□ -2.146e-7■■■□□ 15.9
XRN1-214ENST00000498077 CCSER2Q9H7U1 834 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 THEGQ9P2T0 379 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ATXN7L1Q9ULK2 861 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 FNDC3AQ9Y2H6 1198 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 CEP83Q9Y592 693 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 PEAK1Q9H792 1746 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SOS2Q07890 1332 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 A0A1B0GTL3 188 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 J3QL48 77 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 PLOD2O00469 737 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 KCNK3O14649 394 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ARHGAP6O43182 974 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 EXOC3O60645 756 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 HSPA4LO95757 839 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 BMP6P22004 513 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 AVPR2P30518 371 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 DUTP33316 252 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 TNNT2P45379 298 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 RAG2P55895 527 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 FGD1P98174 961 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 STK3Q13188 491 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MAB21L1Q13394 359 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 HNRNPDQ14103 355 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 NAA30Q147X3 362 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 ZBED5Q49AG3 693 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 PPP1R26Q5T8A7 1209 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 BRINP3Q76B58 766 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 JAMLQ86YT9 394 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CCDC50Q8IVM0 306 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 GPR161Q8N6U8 529 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 ADAMTS19Q8TE59 1207 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SPACA7Q96KW9 195 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 NEK1Q96PY6 1258 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SPATA25Q9BR10 227 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 UTP14AQ9BVJ6 771 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 C1QTNF2Q9BXJ5 285 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MRS2Q9HD23 443 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 C11orf16Q9NQ32 467 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SH3BP4Q9P0V3 963 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 WHRNQ9P202 907 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ZNHIT2Q9UHR6 403 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 GPN3Q9UHW5 284 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 AFG3L2Q9Y4W6 797 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 PIEZO1Q92508 2521 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 NPEPPSL1A6NEC2 478 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 IKBKBO14920 756 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ST8SIA5O15466 376 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MOCS3O95396 460 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SBK2P0C263 348 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ADCY8P40145 1251 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SRPK2P78362 688 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 GALK2Q01415 458 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 NFX1Q12986 1120 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 PLA2G7Q13093 441 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 INO80DQ53TQ3 878 aaPredicted RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 ARSHQ5FYA8 562 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 TAF7LQ5H9L4 462 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CCDC30Q5VVM6 783 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CREB3L3Q68CJ9 461 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SV2BQ7L1I2 683 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 AMIGO2Q86SJ2 522 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 FOXJ1Q92949 421 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CCDC120Q96HB5 630 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 GRAMD2BQ96HH9 432 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 TMX3Q96JJ7 454 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 IPO9Q96P70 1041 aaKnown RBP1.67□□□□□ -2.14
XRN1-214ENST00000498077 GPR20Q99678 358 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 MAPKAP1Q9BPZ7 522 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 COLEC11Q9BWP8 271 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CARD10Q9BWT7 1032 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 CNTD2Q9H8S5 307 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ZNF304Q9HCX3 659 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 HOMER2Q9NSB8 354 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 SH3GLB1Q9Y371 365 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ARHGAP31Q2M1Z3 1444 aa1.67□□□□□ -2.14
XRN1-214ENST00000498077 ALS2Q96Q42 1657 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CNTNAP5Q8WYK1 1306 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA8QA0A0J9YX86 632 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA8OA6NCC3 632 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA8NF8WBI6 632 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GNB5O14775 395 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KINO60870 393 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 ADAMTS2O95450 1211 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ATP1A3P13637 1013 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CCND1P24385 295 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CIITAP33076 1130 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms