RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TNFRSF12AQ9NP84 129 aa4.39□□□□□ -1.71
RIF1-212ENST00000498041 HRKO00198 91 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 NUAK1O60285 661 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 DLX3O60479 287 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 PEX10O60683 326 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 PPP1R11O60927 126 aaPredicted RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 PABPC1P11940 636 aaKnown RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 SDHBP21912 280 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 TACR1P25103 407 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 LTBRP36941 435 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 YBX1P67809 324 aaKnown RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 TMEM62Q0P6H9 643 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 NR1I3Q14994 352 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 RAB3GAP1Q15042 981 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 KCNA10Q16322 511 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 INF2Q27J81 1249 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 OLFML2BQ68BL8 750 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 MBLAC2Q68D91 279 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 DENND5AQ6IQ26 1287 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 NSMFQ6X4W1 530 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 CABP7Q86V35 215 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 SIAH1Q8IUQ4 282 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 CCDC103Q8IW40 242 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 ZBTB38Q8NAP3 1195 aaPredicted RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 OSBP2Q969R2 916 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 DNAJC7Q99615 494 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 IRF2BPLQ9H1B7 796 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.38□□□□□ -1.71
RIF1-212ENST00000498041 GULP1Q9UBP9 304 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 TMEFF2Q9UIK5 374 aaPredicted RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 CDK11AQ9UQ88 783 aaPredicted RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 RWDD3Q9Y3V2 267 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 TIMM13Q9Y5L4 95 aaPredicted RBP4.38□□□□□ -1.71
RIF1-212ENST00000498041 KDM2BQ8NHM5 1336 aa4.38□□□□□ -1.71
RIF1-212ENST00000498041 NUDT19A8MXV4 375 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 ETV2O00321 342 aaPredicted RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 ARNTLO00327 626 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 SRGAP3O43295 1099 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 MYO1BO43795 1136 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 ADCY3O60266 1144 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 KRT1P04264 644 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 CYBBP04839 570 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 DBHP09172 617 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 GTF2A2P52657 109 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 RPL11P62913 178 aaKnown RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 BMS1Q14692 1282 aaKnown RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 CBX2Q14781 532 aaPredicted RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 YOD1Q5VVQ6 348 aaPredicted RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 TMEM132EQ6IEE7 984 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 PAQR3Q6TCH7 311 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 SCUBE1Q8IWY4 988 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 USP33Q8TEY7 942 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 DPF3Q92784 378 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 KCNN1Q92952 543 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 IPO9Q96P70 1041 aaKnown RBP4.37□□□□□ -1.71
RIF1-212ENST00000498041 CDC6Q99741 560 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 LNPKQ9C0E8 428 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 ZSWIM4Q9H7M6 989 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 KLHL14Q9P2G3 628 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 NPFFR2Q9Y5X5 522 aa4.37□□□□□ -1.71
RIF1-212ENST00000498041 TEX51A0A1B0GUA7 166 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 SEMA7AO75326 666 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 FUCA1P04066 466 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 FAM153BP0C7A2 387 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 GLI4P10075 376 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 RANGAP1P46060 587 aaPredicted RBP4.36□□□□□ -1.71
RIF1-212ENST00000498041 MAPKAPK2P49137 400 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 CCDC144BQ3MJ40 725 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 ZC3H12BQ5HYM0 836 aaKnown RBP4.36□□□□□ -1.71
RIF1-212ENST00000498041 RSPO2Q6UXX9 243 aaPredicted RBP4.36□□□□□ -1.71
RIF1-212ENST00000498041 RPTNQ6XPR3 784 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 USP53Q70EK8 1073 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 DPH6Q7L8W6 267 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 RCBTB1Q8NDN9 531 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 PLEKHO2Q8TD55 490 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 DCAF4Q8WV16 495 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 MRFAP1L1Q96HT8 127 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 MCOLN1Q9GZU1 580 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 BTG4Q9NY30 223 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 MARCH2Q9P0N8 246 aa4.36□□□□□ -1.71
RIF1-212ENST00000498041 SMG5Q9UPR3 1016 aaKnown RBP4.36□□□□□ -1.71
RIF1-212ENST00000498041 TRBV23-1A0A0A0MS06 115 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 MYOCOSA0A1B0GUC4 107 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 LCP1P13796 627 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 BMP7P18075 431 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 HOXA5P20719 270 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 VIPR1P32241 457 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 BCL6P41182 706 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
RIF1-212ENST00000498041 LSAMPQ13449 338 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 ZC3H14Q6PJT7 736 aaKnown RBP4.35□□□□□ -1.71
RIF1-212ENST00000498041 CEP68Q76N32 757 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 TEX2Q8IWB9 1127 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 NETO2Q8NC67 525 aa4.35□□□□□ -1.71
RIF1-212ENST00000498041 THAP3Q8WTV1 239 aaPredicted RBP4.35□□□□□ -1.71
RIF1-212ENST00000498041 TRMT2BQ96GJ1 504 aaKnown RBP4.35□□□□□ -1.71
RIF1-212ENST00000498041 CHAMP1Q96JM3 812 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms