RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 TTYH1Q9H313 450 aaPredicted RBP13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
NUDCD3-211ENST00000497978 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 B4GALT4O60513 344 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 KPNA6O60684 536 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 ACRP10323 421 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 DNAJB2P25686 324 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 PURAQ00577 322 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 C16orf59Q7L2K0 433 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 TRPV6Q9H1D0 765 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 IL23AQ9NPF7 189 aa13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
NUDCD3-211ENST00000497978 FGBP02675 491 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 TXNP10599 105 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 FOSL2P15408 326 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 PDE4AP27815 886 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
NUDCD3-211ENST00000497978 ERICH2A1L162 156 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 CCL23P55773 120 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 MYH6P13533 1939 aa13.7□□□□□ -0.22
NUDCD3-211ENST00000497978 A6NJR5 290 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 KLRF2D3W0D1 207 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 STXBP2Q15833 593 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 NFRKBQ6P4R8 1299 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 TAAR1Q96RJ0 339 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 IL25Q9H293 177 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 ZNF576Q9H609 170 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
NUDCD3-211ENST00000497978 UMODL1Q5DID0 1318 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 COL6A3P12111 3177 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 CFBP00751 764 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 GH1P01241 217 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 CHMLP26374 656 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 TRAF1Q13077 416 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 SEC23AQ15436 765 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 RAB30Q15771 203 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 RALYLQ86SE5 291 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 COPS5Q92905 334 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 PBX4Q9BYU1 374 aa13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 TRMT13Q9NUP7 481 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-211ENST00000497978 GRXCR1A8MXD5 290 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 ZBTB5O15062 677 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 ARIH2O95376 493 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 PFKMP08237 780 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 CYP2C9P11712 490 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 PTPN11Q06124 597 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 GRIN2CQ14957 1233 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 OTOP2Q7RTS6 562 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 WNT8AQ9H1J5 351 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 COL20A1Q9P218 1284 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
NUDCD3-211ENST00000497978 SCN10AQ9Y5Y9 1956 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 CYP21A2P08686 494 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 PBX2P40425 430 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 PTH1RQ03431 593 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms