RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 HAUS7Q99871 368 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRIM8Q9BZR9 551 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PRO3102Q9H379 93 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PRDM11Q9NQV5 511 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 CHST12Q9NRB3 414 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZIM2Q9NZV7 527 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF69Q9UC07 566 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SFMBT1Q9UHJ3 866 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PNMA8BQ9ULN7 279 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PCDHA4Q9UN74 947 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 EMC9Q9Y3B6 208 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 PARP4Q9UKK3 1724 aaKnown RBP3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 SSH2Q76I76 1423 aa3.19□□□□□ -1.9
CKS1BP2-201ENST00000497342 KIAA0232Q92628 1395 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TCRBV16S1A1N1A0A5B0 115 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ANO9A1A5B4 782 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 KLRG2A4D1S0 409 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GOLGA6CA6NDK9 693 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GOLGA6BA6NDN3 693 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CHURC1-FNTBB4DL54 471 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TNFRSF10AO00220 468 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 C2CD2LO14523 706 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 SHOXO15266 292 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 KATNA1O75449 491 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 KRT37O76014 449 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ITGAVP06756 1048 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GOLGA6DP0CG33 693 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 IGFALSP35858 605 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF157P51786 506 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 YARSP54577 528 aaKnown RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CABP4P57796 275 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ERVK-21P61565 698 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GRB10Q13322 594 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 DHX8Q14562 1220 aaKnown RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 RALBP1Q15311 655 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 POU4F3Q15319 338 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 LRRC41Q15345 812 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 DDB1Q16531 1140 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GFOD2Q3B7J2 385 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GNPTABQ3T906 1256 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CT47A1Q5JQC4 288 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC35F1Q5T1Q4 408 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZBTB37Q5TC79 503 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 YOD1Q5VVQ6 348 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 STYK1Q6J9G0 422 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 RSPO2Q6UXX9 243 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 LHFPL2Q6ZUX7 228 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CTU1Q7Z7A3 348 aaKnown RBP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 SYT9Q86SS6 491 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 MAP4K3Q8IVH8 894 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 SPNS2Q8IVW8 549 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ATL2Q8NHH9 583 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CYB5D2Q8WUJ1 264 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TMEM87BQ96K49 555 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZFYVE21Q9BQ24 234 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 IFT22Q9H7X7 185 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 SLC52A2Q9HAB3 445 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CBX8Q9HC52 389 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 CRTAC1Q9NQ79 661 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 DDX21Q9NR30 783 aaKnown RBP eCLIP3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 GOLGA6AQ9NYA3 693 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 WHRNQ9P202 907 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TJP2Q9UDY2 1190 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 KLF15Q9UIH9 416 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TRIM33Q9UPN9 1127 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 NPFFR2Q9Y5X5 522 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 LRRC37A3O60309 1634 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 TNKSO95271 1327 aa3.18□□□□□ -1.9
CKS1BP2-201ENST00000497342 MEGF11A6BM72 1044 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 FIGNL2A6NMB9 653 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 DLX3O60479 287 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 AOC2O75106 756 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 DGAT1O75907 488 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 LDHAP00338 332 aaKnown RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 EPHX1P07099 455 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CTSBP07858 339 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 NAT1P18440 290 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 EIF2AK2P19525 551 aaKnown RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ITGA6P23229 1130 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 GRK4P32298 578 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ADH7P40394 386 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 GFRA1P56159 465 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 ZNF280AP59817 542 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CTBSQ01459 385 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 DSG1Q02413 1049 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CYP4F3Q08477 520 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 GTF2H3Q13889 308 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 PCBP1Q15365 356 aaKnown RBP eCLIP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CHRNA2Q15822 529 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 NTRK3Q16288 839 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 C21orf62-AS1Q17RA5 79 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 AXDND1Q5T1B0 1012 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 CYP4F22Q6NT55 531 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 POMZP3Q6PJE2 187 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 NSMFQ6X4W1 530 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 BRAPQ7Z569 592 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 APBB1IPQ7Z5R6 666 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 C11orf96Q7Z7L8 435 aa3.17□□□□□ -1.9
CKS1BP2-201ENST00000497342 FAM35AQ86V20 835 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms