RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CNTN2Q02246 1040 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.92
RGP1-202ENST00000496906 CHAMP1Q96JM3 812 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 RMDN3Q96TC7 470 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 PXMP2Q9NR77 195 aa20.83■□□□□ 0.92
RGP1-202ENST00000496906 ASTN1O14525 1302 aa20.82■□□□□ 0.92
RGP1-202ENST00000496906 WNT7AO00755 349 aa20.82■□□□□ 0.92
RGP1-202ENST00000496906 CTGFP29279 349 aa20.82■□□□□ 0.92
RGP1-202ENST00000496906 LACTBP83111 547 aaPredicted RBP20.82■□□□□ 0.92
RGP1-202ENST00000496906 DNERQ8NFT8 737 aa20.82■□□□□ 0.92
RGP1-202ENST00000496906 SLC15A5A6NIM6 579 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
RGP1-202ENST00000496906 EIF2AK2P19525 551 aaKnown RBP20.81■□□□□ 0.92
RGP1-202ENST00000496906 UBXN2AP68543 259 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 SP3Q02447 781 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 NBR1Q14596 966 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 ARHGEF16Q5VV41 709 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 NSUN6Q8TEA1 469 aaKnown RBP20.81■□□□□ 0.92
RGP1-202ENST00000496906 FGD4Q96M96 766 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
RGP1-202ENST00000496906 USP28Q96RU2 1077 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 ZNF236Q9UL36 1845 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 MYH15Q9Y2K3 1946 aa20.81■□□□□ 0.92
RGP1-202ENST00000496906 SOWAHBA6NEL2 793 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 CYP3A4P08684 503 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 ATP2B1P20020 1258 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 USP11P51784 963 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 PGM5Q15124 567 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 LETM2Q2VYF4 491 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 TTC38Q5R3I4 469 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 MORN1Q5T089 497 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 IL31RAQ8NI17 732 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 FTOQ9C0B1 505 aaKnown RBP eCLIP20.8■□□□□ 0.92
RGP1-202ENST00000496906 ADD3Q9UEY8 706 aaKnown RBP20.8■□□□□ 0.92
RGP1-202ENST00000496906 PCDHB6Q9Y5E3 794 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 MYH7BA7E2Y1 1941 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 GPR25O00155 361 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 TNPO2O14787 897 aaKnown RBP20.8■□□□□ 0.92
RGP1-202ENST00000496906 COBLO75128 1261 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 ALDH5A1P51649 535 aaPredicted RBP20.8■□□□□ 0.92
RGP1-202ENST00000496906 FCGRTP55899 365 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 ZNF792Q3KQV3 632 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 BEGAINQ9BUH8 593 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 ARHGAP39Q9C0H5 1083 aa20.8■□□□□ 0.92
RGP1-202ENST00000496906 PSMC4P43686 418 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 KRT85P78386 507 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 PCNX4Q63HM2 1172 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 MOXD1Q6UVY6 613 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 CLEC17AQ6ZS10 378 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.79■□□□□ 0.92
RGP1-202ENST00000496906 POLR3EQ9NVU0 708 aa20.79■□□□□ 0.92
RGP1-202ENST00000496906 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
RGP1-202ENST00000496906 CCNT1O60563 726 aaKnown RBP20.78■□□□□ 0.92
RGP1-202ENST00000496906 TDP2O95551 362 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 CIITAP33076 1130 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 MAP2K5Q13163 448 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 ANO1Q5XXA6 986 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 PPP4R3AQ6IN85 833 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 USP6NLQ92738 828 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 TRIM47Q96LD4 638 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
RGP1-202ENST00000496906 CYP3A7-CYP3A51PA0A087WV96 503 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 BAG4O95429 457 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 NR3C2P08235 984 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 GCFC2P16383 781 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 CYP3A7P24462 503 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 EDNRBP24530 442 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 NASPP49321 788 aaPredicted RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 CAP1Q01518 475 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 ORC2Q13416 577 aaPredicted RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 SF3A1Q15459 793 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 ZNF174Q15697 407 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 XRRA1Q6P2D8 792 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 DPP9Q86TI2 863 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 MBOAT7Q96N66 472 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 NAP1L4Q99733 375 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 NUDT12Q9BQG2 462 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 RTEL1Q9NZ71 1219 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 GJD2Q9UKL4 321 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 CFAP45Q9UL16 551 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 ZNFX1Q9P2E3 1918 aaKnown RBP20.77■□□□□ 0.92
RGP1-202ENST00000496906 ZSWIM8A7E2V4 1837 aa20.77■□□□□ 0.92
RGP1-202ENST00000496906 LOC102724159A0A0B4J2E5 919 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 CCND2P30279 289 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 MCM7P33993 719 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 MRPS9P82933 396 aaKnown RBP20.76■□□□□ 0.91
RGP1-202ENST00000496906 CEBPZQ03701 1054 aaKnown RBP20.76■□□□□ 0.91
RGP1-202ENST00000496906 KIF22Q14807 665 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 PWP2Q15269 919 aaKnown RBP20.76■□□□□ 0.91
RGP1-202ENST00000496906 VSIG10LQ86VR7 867 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 DIS3Q9Y2L1 958 aaKnown RBP20.76■□□□□ 0.91
RGP1-202ENST00000496906 MGAMO43451 1857 aa20.76■□□□□ 0.91
RGP1-202ENST00000496906 FAM86B1E9PN63 330 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms