RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ITGA7Q13683 1181 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 TTLL4Q14679 1199 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 STXBP2Q15833 593 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 FAM126BQ8IXS8 530 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 LY9Q9HBG7 655 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 SENP2Q9HC62 589 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 ANO2Q9NQ90 1003 aa28.13■■■□□ 2.09
HLA-C-209ENST00000495835 PNMA6FA0A0J9YX94 578 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 KPNA6O60684 536 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 ITGB8P26012 769 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 KIF5BP33176 963 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 LIFRP42702 1097 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 TMEM63BQ5T3F8 832 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 RNF20Q5VTR2 975 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 CREB3L3Q68CJ9 461 aa28.12■■■□□ 2.09
HLA-C-209ENST00000495835 PRC1O43663 620 aa28.11■■■□□ 2.09
HLA-C-209ENST00000495835 CFBP00751 764 aa28.11■■■□□ 2.09
HLA-C-209ENST00000495835 CD4P01730 458 aa28.11■■■□□ 2.09
HLA-C-209ENST00000495835 TXNP10599 105 aaKnown RBP28.11■■■□□ 2.09
HLA-C-209ENST00000495835 LZTS2Q9BRK4 669 aa28.11■■■□□ 2.09
HLA-C-209ENST00000495835 COL20A1Q9P218 1284 aa28.11■■■□□ 2.09
HLA-C-209ENST00000495835 KIAA1217Q5T5P2 1943 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 A6NJR5 290 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 OPLAHO14841 1288 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 PPP1R11O60927 126 aaPredicted RBP28.1■■■□□ 2.09
HLA-C-209ENST00000495835 FPGSQ05932 587 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 SHHQ15465 462 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 ARHGEF16Q5VV41 709 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 ZNF654Q8IZM8 581 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 OR6J1Q8NGC5 347 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 CTCFLQ8NI51 663 aaPredicted RBP28.1■■■□□ 2.09
HLA-C-209ENST00000495835 PIGSQ96S52 555 aa28.1■■■□□ 2.09
HLA-C-209ENST00000495835 CYTH3O43739 400 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 EIF3JO75822 258 aaKnown RBP28.09■■■□□ 2.09
HLA-C-209ENST00000495835 CALM1P0DP23 149 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 CALM2P0DP24 149 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 CALM3P0DP25 149 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 GNAQP50148 359 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 SLC35G1Q2M3R5 365 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 MFSD5Q6N075 450 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 CCDC62Q6P9F0 684 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 CCDC136Q96JN2 1154 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 SPZ1Q9BXG8 430 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 GPHNQ9NQX3 736 aaPredicted RBP28.09■■■□□ 2.09
HLA-C-209ENST00000495835 PXMP2Q9NR77 195 aa28.09■■■□□ 2.09
HLA-C-209ENST00000495835 BAZ2BQ9UIF8 2168 aaKnown RBP28.09■■■□□ 2.09
HLA-C-209ENST00000495835 SH2B2O14492 632 aaPredicted RBP28.08■■■□□ 2.09
HLA-C-209ENST00000495835 CDC45O75419 566 aa28.08■■■□□ 2.09
HLA-C-209ENST00000495835 PURAQ00577 322 aaKnown RBP28.08■■■□□ 2.09
HLA-C-209ENST00000495835 FAM109BQ6ICB4 259 aaPredicted RBP28.08■■■□□ 2.09
HLA-C-209ENST00000495835 HOMER1Q86YM7 354 aa28.08■■■□□ 2.09
HLA-C-209ENST00000495835 GRIN2DO15399 1336 aa28.08■■■□□ 2.09
HLA-C-209ENST00000495835 CCDC69A6NI79 296 aa28.07■■■□□ 2.08
HLA-C-209ENST00000495835 NR3C2P08235 984 aa28.07■■■□□ 2.08
HLA-C-209ENST00000495835 PTGS1P23219 599 aa28.07■■■□□ 2.08
HLA-C-209ENST00000495835 MTG1Q9BT17 334 aaPredicted RBP28.07■■■□□ 2.08
HLA-C-209ENST00000495835 TSGA10IPQ3SY00 556 aa28.06■■■□□ 2.08
HLA-C-209ENST00000495835 C9orf50Q5SZB4 431 aa28.06■■■□□ 2.08
HLA-C-209ENST00000495835 TMEM199Q8N511 208 aa28.06■■■□□ 2.08
HLA-C-209ENST00000495835 GCOM1H8Y6P7 765 aaPredicted RBP28.05■■■□□ 2.08
HLA-C-209ENST00000495835 POLR2MP0CAP2 368 aa28.05■■■□□ 2.08
HLA-C-209ENST00000495835 PPIGQ13427 754 aaKnown RBP eCLIP28.05■■■□□ 2.08
HLA-C-209ENST00000495835 KCNV1Q6PIU1 500 aa28.05■■■□□ 2.08
HLA-C-209ENST00000495835 NFXL1Q6ZNB6 911 aa28.05■■■□□ 2.08
HLA-C-209ENST00000495835 ARIH2O95376 493 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 GH1P01241 217 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 SUPT20HL2P0C7V6 817 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 EIF2AK2P19525 551 aaKnown RBP28.04■■■□□ 2.08
HLA-C-209ENST00000495835 SEPT14Q6ZU15 432 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 SGMS1Q86VZ5 419 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 SKAP1Q86WV1 359 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 DEFB123Q8N688 67 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 RRP36Q96EU6 259 aaKnown RBP28.04■■■□□ 2.08
HLA-C-209ENST00000495835 PDCD2LQ9BRP1 358 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 SCN10AQ9Y5Y9 1956 aa28.04■■■□□ 2.08
HLA-C-209ENST00000495835 MYL3P08590 195 aa28.03■■■□□ 2.08
HLA-C-209ENST00000495835 PTPN11Q06124 597 aaPredicted RBP28.03■■■□□ 2.08
HLA-C-209ENST00000495835 VSIG10LQ86VR7 867 aa28.03■■■□□ 2.08
HLA-C-209ENST00000495835 COPS5Q92905 334 aa28.03■■■□□ 2.08
HLA-C-209ENST00000495835 EMID1Q96A84 441 aaPredicted RBP28.03■■■□□ 2.08
HLA-C-209ENST00000495835 NEK1Q96PY6 1258 aa28.03■■■□□ 2.08
HLA-C-209ENST00000495835 PSMC6P62333 389 aa28.02■■■□□ 2.08
HLA-C-209ENST00000495835 SMAD3P84022 425 aaKnown RBP28.02■■■□□ 2.08
HLA-C-209ENST00000495835 KRT32Q14532 448 aa28.02■■■□□ 2.08
HLA-C-209ENST00000495835 NFRKBQ6P4R8 1299 aa28.02■■■□□ 2.08
HLA-C-209ENST00000495835 ALDH8A1Q9H2A2 487 aaPredicted RBP28.02■■■□□ 2.08
HLA-C-209ENST00000495835 DDX41Q9UJV9 622 aaKnown RBP28.02■■■□□ 2.08
HLA-C-209ENST00000495835 SLC12A7Q9Y666 1083 aa28.02■■■□□ 2.08
HLA-C-209ENST00000495835 TGFB3P10600 412 aa28.01■■■□□ 2.07
HLA-C-209ENST00000495835 EPHB4P54760 987 aa28.01■■■□□ 2.07
HLA-C-209ENST00000495835 PGM5Q15124 567 aa28.01■■■□□ 2.07
HLA-C-209ENST00000495835 LY6KQ17RY6 165 aa28.01■■■□□ 2.07
HLA-C-209ENST00000495835 SEC63Q9UGP8 760 aaKnown RBP28.01■■■□□ 2.07
HLA-C-209ENST00000495835 B4GALT4O60513 344 aa28■■■□□ 2.07
HLA-C-209ENST00000495835 HOXA13P31271 388 aaPredicted RBP28■■■□□ 2.07
HLA-C-209ENST00000495835 ARHGAP1Q07960 439 aa28■■■□□ 2.07
HLA-C-209ENST00000495835 RNPC3Q96LT9 517 aaKnown RBP28■■■□□ 2.07
HLA-C-209ENST00000495835 MYL10Q9BUA6 226 aa28■■■□□ 2.07
HLA-C-209ENST00000495835 HIPK3Q9H422 1215 aa28■■■□□ 2.07
HLA-C-209ENST00000495835 STAM2O75886 525 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms