RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 FBXO11Q86XK2 927 aa21.49■■□□□ 1.03
CLCNKA-207ENST00000495784 RUFY2Q8WXA3 655 aa21.49■■□□□ 1.03
CLCNKA-207ENST00000495784 MRPL11Q9Y3B7 192 aaKnown RBP21.49■■□□□ 1.03
CLCNKA-207ENST00000495784 KPNA6O60684 536 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 FGBP02675 491 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 SUPT20HL2P0C7V6 817 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 TRDNQ13061 729 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 FAM47CQ5HY64 1035 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 SYTL5Q8TDW5 730 aaPredicted RBP21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 NSUN6Q8TEA1 469 aaKnown RBP21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 HERVK_113Q902F9 699 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 TBC1D5Q92609 795 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 COPS5Q92905 334 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 ZNF576Q9H609 170 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 JMJD4Q9H9V9 463 aa21.48■■□□□ 1.03
CLCNKA-207ENST00000495784 GRXCR1A8MXD5 290 aa21.47■■□□□ 1.03
CLCNKA-207ENST00000495784 GRIN2CQ14957 1233 aa21.47■■□□□ 1.03
CLCNKA-207ENST00000495784 TAAR1Q96RJ0 339 aa21.47■■□□□ 1.03
CLCNKA-207ENST00000495784 WNT8AQ9H1J5 351 aa21.47■■□□□ 1.03
CLCNKA-207ENST00000495784 TRMT13Q9NUP7 481 aaKnown RBP21.47■■□□□ 1.03
CLCNKA-207ENST00000495784 A6NJR5 290 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 PBX2P40425 430 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 OTOP2Q7RTS6 562 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 RPUSD2Q8IZ73 545 aaKnown RBP21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 RMDN3Q96TC7 470 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 PBX4Q9BYU1 374 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 COL20A1Q9P218 1284 aa21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 U3KPZ7 1027 aaPredicted RBP21.46■■□□□ 1.03
CLCNKA-207ENST00000495784 KLRF2D3W0D1 207 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 ARIH2O95376 493 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 CYP2C9P11712 490 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 SEC23AQ15436 765 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 STXBP2Q15833 593 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 NBPF20Q3BBV1 942 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 SEPT14Q6ZU15 432 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 CYB5R4Q7L1T6 521 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 STAG2Q8N3U4 1231 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 IWS1Q96ST2 819 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 AMNQ9BXJ7 453 aa21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 CXXC1Q9P0U4 656 aaPredicted RBP21.45■■□□□ 1.02
CLCNKA-207ENST00000495784 CFBP00751 764 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 CHMP4BP1P59074 171 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 RAB30Q15771 203 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 ARHGEF16Q5VV41 709 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 NFRKBQ6P4R8 1299 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 SCLYQ96I15 445 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 MSRAQ9UJ68 235 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 UNC80Q8N2C7 3258 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 CDH23Q9H251 3354 aa21.44■■□□□ 1.02
CLCNKA-207ENST00000495784 CUL9Q8IWT3 2517 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 GH1P01241 217 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 EIF2AK2P19525 551 aaKnown RBP21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 CHMLP26374 656 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 CCDC62Q6P9F0 684 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 RALYLQ86SE5 291 aaKnown RBP21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 AFG1LQ8WV93 481 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 NOD1Q9Y239 953 aa21.43■■□□□ 1.02
CLCNKA-207ENST00000495784 ERICH2A1L162 156 aa21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 IFIT3O14879 490 aaKnown RBP21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 CYP21A2P08686 494 aa21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 PTH1RQ03431 593 aa21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 PTPN11Q06124 597 aaPredicted RBP21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 LY6KQ17RY6 165 aa21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 PPP1R13LQ8WUF5 828 aa21.42■■□□□ 1.02
CLCNKA-207ENST00000495784 PALM3A6NDB9 673 aaPredicted RBP21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 ZBBXA8MT70 800 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 ZBTB5O15062 677 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 PFKMP08237 780 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 SART3Q15020 963 aaKnown RBP21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 RETREG2Q8NC44 543 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 COL25A1Q9BXS0 654 aaPredicted RBP21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 PXMP2Q9NR77 195 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 MAD2L2Q9UI95 211 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 PCDHA1Q9Y5I3 950 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 SLC4A7Q9Y6M7 1214 aa21.41■■□□□ 1.02
CLCNKA-207ENST00000495784 NR3C2P08235 984 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 MMP3P08254 477 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 HSD17B4P51659 736 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 ARHGAP1Q07960 439 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 TRAF1Q13077 416 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 DEFB128Q7Z7B8 93 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 HOMER1Q86YM7 354 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 NCOA7Q8NI08 942 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 MTMR8Q96EF0 704 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 GAS2L1Q99501 681 aaPredicted RBP21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 MRVI1Q9Y6F6 885 aa21.4■■□□□ 1.02
CLCNKA-207ENST00000495784 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.02
CLCNKA-207ENST00000495784 EYSQ5T1H1 3165 aa21.39■■□□□ 1.02
CLCNKA-207ENST00000495784 OPLAHO14841 1288 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 PPP1R11O60927 126 aaPredicted RBP21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 CASTP20810 708 aaKnown RBP21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 BFSP2Q13515 415 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 GRM4Q14833 912 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 WTAPQ15007 396 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 NKX2-4Q9H2Z4 354 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 MAP3K20Q9NYL2 800 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms