RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SIGLEC10Q96LC7 697 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 MTA3Q9BTC8 594 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 SGPP1Q9BX95 441 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 CD320Q9NPF0 282 aa8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
NCKAP1-208ENST00000495619 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 FGFR1P11362 822 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 PRR5P85299 388 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 TESK1Q15569 626 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 NSMFQ6X4W1 530 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 LDHDQ86WU2 507 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 DCP2Q8IU60 420 aaKnown RBP8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 TRMT2BQ96GJ1 504 aaKnown RBP8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 SPATA9Q9BWV2 254 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 CNTD2Q9H8S5 307 aa8.09□□□□□ -1.11
NCKAP1-208ENST00000495619 C22orf46C9J442 243 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 PRODHO43272 600 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 NUAK1O60285 661 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 LINC00310P59036 64 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 SF1Q15637 639 aaKnown RBP8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 MROH9Q5TGP6 573 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 CEP68Q76N32 757 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 TMEM151BQ8IW70 566 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 KREMEN2Q8NCW0 462 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 TMEM169Q96HH4 297 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 GCM1Q9NP62 436 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 FAN1Q9Y2M0 1017 aa8.08□□□□□ -1.12
NCKAP1-208ENST00000495619 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 KRT1P04264 644 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 LSAMPQ13449 338 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 INF2Q27J81 1249 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 PRSS53Q2L4Q9 553 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 KRTAP19-4Q3LI73 84 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 SLC35F1Q5T1Q4 408 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 LRRC56Q8IYG6 542 aaPredicted RBP8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 MKL1Q969V6 931 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 TSPAN17Q96FV3 270 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 CDC6Q99741 560 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 KCTD3Q9Y597 815 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 PCDHA2Q9Y5H9 948 aa8.07□□□□□ -1.12
NCKAP1-208ENST00000495619 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 PPP1R11O60927 126 aaPredicted RBP8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 NTRK1P04629 796 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 APPP05067 770 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 PABPC1P11940 636 aaKnown RBP8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 NCAM1P13591 858 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 GRIA2P42262 883 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 CDR1P51861 262 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 ZNF200P98182 395 aaPredicted RBP8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 CYP4F3Q08477 520 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 FZD5Q13467 585 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 MBLAC2Q68D91 279 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 RSPO2Q6UXX9 243 aaPredicted RBP8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 TEX2Q8IWB9 1127 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 PLEKHO2Q8TD55 490 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 ALG3Q92685 438 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 DEPDC7Q96QD5 511 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 SRPK1Q96SB4 655 aaKnown RBP8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 RNF38Q9H0F5 515 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
NCKAP1-208ENST00000495619 H7BY64 318 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 DLX3O60479 287 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 CAPNS1P04632 268 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 BCL6P41182 706 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 RIOX2Q8IUF8 465 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 CCDC103Q8IW40 242 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 SCUBE1Q8IWY4 988 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 RCBTB1Q8NDN9 531 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 SEC14L1Q92503 715 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 DPF3Q92784 378 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 ARHGEF4Q9NR80 690 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 PFDN2Q9UHV9 154 aa8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 TMEFF2Q9UIK5 374 aaPredicted RBP8.05□□□□□ -1.12
NCKAP1-208ENST00000495619 BUB1BO60566 1050 aaPredicted RBP8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 CFPP27918 469 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 EPHB3P54753 998 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 SERINC3Q13530 473 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 SPATC1Q76KD6 591 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 C1orf159Q96HA4 380 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 ZFYVE21Q9BQ24 234 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 PCDHA5Q9Y5H7 936 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 NPFFR2Q9Y5X5 522 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 X6R8D5 127 aa8.04□□□□□ -1.12
NCKAP1-208ENST00000495619 MAFKO60675 156 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 SLC6A11P48066 632 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 JAG1P78504 1218 aa8.03□□□□□ -1.12
NCKAP1-208ENST00000495619 NFE2L2Q16236 605 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms