RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
HLA-DOA-206ENST00000495532 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.26
HLA-DOA-206ENST00000495532 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 KPNA6O60684 536 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 SNAP25P60880 206 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 FOXK2Q01167 660 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 TCF15Q12870 199 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 FAM160B2Q86V87 743 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 MYO15AQ9UKN7 3530 aa13.45□□□□□ -0.26
HLA-DOA-206ENST00000495532 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 RAD50Q92878 1312 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 GSG1L2A8MUP6 293 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PLA2G6O60733 806 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 EFCAB14O75071 495 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PRDM1O75626 825 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 LTBRP36941 435 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PWP2Q15269 919 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PTPROQ16827 1216 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 BRDTQ58F21 947 aaPredicted RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 GDF6Q6KF10 455 aaPredicted RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 BMP8AQ7Z5Y6 402 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 COPS5Q92905 334 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 ADD3Q9UEY8 706 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 INSL6Q9Y581 213 aa13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 PTPRZ1P23471 2315 aaPredicted RBP13.44□□□□□ -0.26
HLA-DOA-206ENST00000495532 MINDY4BA8MYZ0 360 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 NKRFO15226 690 aaKnown RBP eCLIP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 GFRA3O60609 400 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 CKBP12277 381 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 HTRA4P83105 476 aaPredicted RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 BAATQ14032 418 aaPredicted RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 SMAD2Q15796 467 aaKnown RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 EDAQ92838 391 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 STRBPQ96SI9 672 aaKnown RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 HAUS7Q99871 368 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
HLA-DOA-206ENST00000495532 H3BNC9 293 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 IFIT2P09913 472 aaKnown RBP13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 RLBP1P12271 317 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 ATP5JP18859 108 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 SLC1A4P43007 532 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 IKBKEQ14164 716 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 MBTPS1Q14703 1052 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 ITPRIPQ8IWB1 547 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 ZNF444Q8N0Y2 327 aaPredicted RBP13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 PRRX2Q99811 253 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 NSUN3Q9H649 340 aaKnown RBP13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 CLDND1Q9NY35 253 aa13.42□□□□□ -0.26
HLA-DOA-206ENST00000495532 RIF1Q5UIP0 2472 aaKnown RBP13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 DCHS1Q96JQ0 3298 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 NFIBO00712 420 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 ARIH2O95376 493 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 ICAM1P05362 532 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 MCCP23508 829 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 EDNRBP24530 442 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 DLX2Q07687 328 aaPredicted RBP13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 GPM6BQ13491 265 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 RPAINQ86UA6 219 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 NEDD1Q8NHV4 660 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 KAT2BQ92831 832 aa13.41□□□□□ -0.26
HLA-DOA-206ENST00000495532 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms