RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
CALD1-222ENST00000495522 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 RABGGTAQ92696 567 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 CHP1Q99653 195 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 CDC23Q9UJX2 597 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
CALD1-222ENST00000495522 POTEMA6NI47 508 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 MYMKA6NI61 221 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
CALD1-222ENST00000495522 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 TBC1D8BQ0IIM8 1120 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 RAD54LQ92698 747 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 LRRC27Q9C0I9 530 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 SLC39A2Q9NP94 309 aa17.13■□□□□ 0.33
CALD1-222ENST00000495522 USP17L10C9JJH3 530 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 APBA3O96018 575 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 SLC16A2P36021 539 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 TMEM119Q4V9L6 283 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 TTYH3Q9C0H2 523 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 TRIM21P19474 475 aaKnown RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 HPS3Q969F9 1004 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 NAP1L4Q99733 375 aaKnown RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 NAPGQ99747 312 aaPredicted RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
CALD1-222ENST00000495522 GLT8D2Q9H1C3 349 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 PSTPIP2Q9H939 334 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 FHOD1Q9Y613 1164 aa17.12■□□□□ 0.33
CALD1-222ENST00000495522 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
CALD1-222ENST00000495522 MEA1Q16626 185 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 DBNDD1Q9H9R9 158 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 ABL1P00519 1130 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 MMP10P09238 476 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 GABPB1Q06547 395 aaPredicted RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 DYMQ7RTS9 669 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
CALD1-222ENST00000495522 ZNHIT6Q9NWK9 470 aaKnown RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 REXO2Q9Y3B8 237 aaKnown RBP17.11■□□□□ 0.33
CALD1-222ENST00000495522 MARCH6O60337 910 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
CALD1-222ENST00000495522 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
CALD1-222ENST00000495522 ZBED6P86452 979 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 PSMD2Q13200 908 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 HAS1Q92839 578 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
CALD1-222ENST00000495522 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
CALD1-222ENST00000495522 PLSCR1O15162 318 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 PNMA6AP0CW24 399 aaPredicted RBP17.09■□□□□ 0.33
CALD1-222ENST00000495522 FIGNQ5HY92 759 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.33
CALD1-222ENST00000495522 MKL1Q969V6 931 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 PCMTD1Q96MG8 357 aaPredicted RBP17.09■□□□□ 0.33
CALD1-222ENST00000495522 EPC1Q9H2F5 836 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 HAUS4Q9H6D7 363 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
CALD1-222ENST00000495522 A0A1W2PQJ5 194 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 RASSF10A6NK89 507 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 TUBB4BP68371 445 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 KRT83P78385 493 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
CALD1-222ENST00000495522 CERKLQ49MI3 558 aaPredicted RBP17.09■□□□□ 0.33
CALD1-222ENST00000495522 DDX12PQ92771 950 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 KANSL2Q9H9L4 492 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 KCNQ5Q9NR82 932 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 ABCB11O95342 1321 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 SIPA1L1O43166 1804 aa17.09■□□□□ 0.33
CALD1-222ENST00000495522 ATP8B1O43520 1251 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 KIF20AO95235 890 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms