RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ADCY7P51828 1080 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 GHRHRQ02643 423 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 PXMP2Q9NR77 195 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 SH2B1Q9NRF2 756 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 DDX20Q9UHI6 824 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 ASTN1O14525 1302 aa13.89□□□□□ -0.19
CSNK1E-213ENST00000495232 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 PIK3CDO00329 1044 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 RARBP10826 455 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 XBP1P17861 261 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 GNA11P29992 359 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 MCM2P49736 904 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 STXBP2Q15833 593 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 USP17L6PQ6QN14 398 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 WASF1Q92558 559 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 VTA1Q9NP79 307 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 RIC8AQ9NPQ8 531 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 MCM3APO60318 1980 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 LCTP09848 1927 aa13.88□□□□□ -0.19
CSNK1E-213ENST00000495232 MEIS2O14770 477 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 LARGE1O95461 756 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 ZNF865P0CJ78 1059 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 MYCLP12524 364 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 EN2P19622 333 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 PKN1Q16512 942 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 ANO1Q5XXA6 986 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 FBXO16Q8IX29 292 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
CSNK1E-213ENST00000495232 EIF3JO75822 258 aaKnown RBP13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 NR3C2P08235 984 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 EDNRBP24530 442 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 CCND2P30279 289 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 NLRP5P59047 1200 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 UBE2SQ16763 222 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 CCDC83Q8IWF9 413 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 PDCD2LQ9BRP1 358 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 SPC25Q9HBM1 224 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 VPS54Q9P1Q0 977 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 ORC3Q9UBD5 711 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 STK36Q9NRP7 1315 aa13.86□□□□□ -0.19
CSNK1E-213ENST00000495232 KIAA0100Q14667 2235 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 ESYT2A0FGR8 921 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 FOSP01100 380 aaPredicted RBP13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 PGM5Q15124 567 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 LHX8Q68G74 356 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 MCTP2Q6DN12 878 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 ARRDC4Q8NCT1 418 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 OGDHLQ9ULD0 1010 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
CSNK1E-213ENST00000495232 DUSP11O75319 330 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 STAM2O75886 525 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 CTDNEP1O95476 244 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 ADCYAP1R1P41586 468 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 TTLL4Q14679 1199 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 RNF180Q86T96 592 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 REXO1Q8N1G1 1221 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 NSUN7Q8NE18 718 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 SCFD2Q8WU76 684 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 LLPHQ9BRT6 129 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 WDR11Q9BZH6 1224 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 KATNBL1Q9H079 304 aa13.84□□□□□ -0.19
CSNK1E-213ENST00000495232 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 TRIM29Q14134 588 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 GNPTABQ3T906 1256 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 JAKMIP3Q5VZ66 844 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 GALNT17Q6IS24 598 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 TAPT1Q6NXT6 567 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 FAM184AQ8NB25 1140 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 ALG1Q9BT22 464 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.2
CSNK1E-213ENST00000495232 PDGFCQ9NRA1 345 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms