RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	EXOSC10	Q01780	885 aa	Known RBP	11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	FAAP100	Q0VG06	881 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	KRT32	Q14532	448 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	CCDC62	Q6P9F0	684 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	SKAP1	Q86WV1	359 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	TEX2	Q8IWB9	1127 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	TBC1D5	Q92609	795 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	PIGS	Q96S52	555 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	UBE2O	Q9C0C9	1292 aa	Known RBP	11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	VAT1L	Q9HCJ6	419 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	COL20A1	Q9P218	1284 aa		11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.93	□□□□□ -0.5
NEPRO-222	ENST00000494891	FRMPD4	Q14CM0	1322 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891		A6NJR5	290 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	DCDC2C	A8MYV0	355 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	DYNC1LI2	O43237	492 aa	Predicted RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	KPNA6	O60684	536 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	EIF3J	O75822	258 aa	Known RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	CD4	P01730	458 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	HMGB1	P09429	215 aa	Known RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	CPT1A	P50416	773 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	IRX5	P78411	483 aa	Predicted RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	PPP2R5B	Q15173	497 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	STXBP2	Q15833	593 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	EEPD1	Q7L9B9	569 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	FAM126B	Q8IXS8	530 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	FBXL16	Q8N461	479 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	CTCFL	Q8NI51	663 aa	Predicted RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	NEK1	Q96PY6	1258 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	TAAR1	Q96RJ0	339 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	RMDN3	Q96TC7	470 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	PXMP2	Q9NR77	195 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	TBX21	Q9UL17	535 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	DDX49	Q9Y6V7	483 aa	Known RBP	11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	SCN10A	Q9Y5Y9	1956 aa		11.92	□□□□□ -0.5
NEPRO-222	ENST00000494891	CCDC69	A6NI79	296 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	PIK3CD	O00329	1044 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	NEFL	P07196	543 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	NR3C2	P08235	984 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	MDM2	Q00987	491 aa	Predicted RBP	11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	BEX3	Q00994	111 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	COL9A3	Q14050	684 aa	Predicted RBP	11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	TTLL4	Q14679	1199 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	TMEM63B	Q5T3F8	832 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	NOL8	Q76FK4	1167 aa	Known RBP	11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	DHX32	Q7L7V1	743 aa	Known RBP	11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	SH3RF1	Q7Z6J0	888 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	EMID1	Q96A84	441 aa	Predicted RBP	11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	PDCD2L	Q9BRP1	358 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	POLR3E	Q9NVU0	708 aa		11.91	□□□□□ -0.5
NEPRO-222	ENST00000494891	GRIN2D	O15399	1336 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	PQBP1	O60828	265 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	CFB	P00751	764 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	TIMP1	P01033	207 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	TXN	P10599	105 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	HSPA4	P34932	840 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	PURA	Q00577	322 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	BRDT	Q58F21	947 aa	Predicted RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	ARHGEF16	Q5VV41	709 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	KCNV1	Q6PIU1	500 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	CXCL17	Q6UXB2	119 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	VSIG10L	Q86VR7	867 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	RASEF	Q8IZ41	740 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	SRBD1	Q8N5C6	995 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	FANCB	Q8NB91	859 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	RRP36	Q96EU6	259 aa	Known RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	GPHN	Q9NQX3	736 aa	Predicted RBP	11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	TMEM39A	Q9NV64	488 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	SLC12A7	Q9Y666	1083 aa		11.9	□□□□□ -0.5
NEPRO-222	ENST00000494891	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	SOX1	O00570	391 aa	Predicted RBP	11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	TLR3	O15455	904 aa	Known RBP	11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	STAM2	O75886	525 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	REC8	O95072	547 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	ARIH2	O95376	493 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	POLR2M	P0CAP2	368 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	TGFB3	P10600	412 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	ITGB8	P26012	769 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	PTPN11	Q06124	597 aa	Predicted RBP	11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	ITGA7	Q13683	1181 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	MFSD5	Q6N075	450 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	APOA5	Q6Q788	366 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	NFXL1	Q6ZNB6	911 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	TMTC3	Q6ZXV5	915 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	HOMER1	Q86YM7	354 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	OR6J1	Q8NGC5	347 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	BAD	Q92934	168 aa		11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.89	□□□□□ -0.51
NEPRO-222	ENST00000494891	RGS20	O76081	388 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	GH1	P01241	217 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	HOXD8	P13378	290 aa	Predicted RBP	11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	RAG1	P15918	1043 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	ARHGAP1	Q07960	439 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	PGM5	Q15124	567 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	ADCK5	Q3MIX3	580 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	XRRA1	Q6P2D8	792 aa		11.88	□□□□□ -0.51
NEPRO-222	ENST00000494891	NFRKB	Q6P4R8	1299 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms