RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
NCL-210ENST00000494618 PEX11GQ96HA9 241 aa8.04□□□□□ -1.12
NCL-210ENST00000494618 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
NCL-210ENST00000494618 GCM1Q9NP62 436 aa8.04□□□□□ -1.12
NCL-210ENST00000494618 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 N4BP3O15049 544 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 FGFR1P11362 822 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 IFRD2Q12894 506 aaPredicted RBP8.03□□□□□ -1.12
NCL-210ENST00000494618 TESK1Q15569 626 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 SLC35F1Q5T1Q4 408 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 ZSCAN18Q8TBC5 510 aaPredicted RBP8.03□□□□□ -1.12
NCL-210ENST00000494618 PMFBP1Q8TBY8 1022 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 MZB1Q8WU39 189 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 TMEFF2Q9UIK5 374 aaPredicted RBP8.03□□□□□ -1.12
NCL-210ENST00000494618 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
NCL-210ENST00000494618 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
NCL-210ENST00000494618 C22orf46C9J442 243 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 PRODHO43272 600 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 ZBTB7AO95365 584 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 PRR5P85299 388 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 SLC9A5Q14940 896 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 CIAPIN1Q6FI81 312 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 NSMFQ6X4W1 530 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 CEP68Q76N32 757 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 CCDC103Q8IW40 242 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 PLEKHO2Q8TD55 490 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 DPF3Q92784 378 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 TRMT2BQ96GJ1 504 aaKnown RBP8.02□□□□□ -1.13
NCL-210ENST00000494618 CHAMP1Q96JM3 812 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 SIGLEC10Q96LC7 697 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
NCL-210ENST00000494618 ARHGEF4Q9NR80 690 aa8.02□□□□□ -1.13
NCL-210ENST00000494618 RFXAPO00287 272 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 DLX3O60479 287 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 NTRK1P04629 796 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 PABPC1P11940 636 aaKnown RBP8.01□□□□□ -1.13
NCL-210ENST00000494618 PFKLP17858 780 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 LINC00310P59036 64 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 ZNF200P98182 395 aaPredicted RBP8.01□□□□□ -1.13
NCL-210ENST00000494618 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
NCL-210ENST00000494618 LSAMPQ13449 338 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 SERINC3Q13530 473 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 TARBP2Q15633 366 aaKnown RBP8.01□□□□□ -1.13
NCL-210ENST00000494618 ZNF385BQ569K4 471 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 USP53Q70EK8 1073 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 SPATC1Q76KD6 591 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 DPH6Q7L8W6 267 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 DCP2Q8IU60 420 aaKnown RBP8.01□□□□□ -1.13
NCL-210ENST00000494618 TEX2Q8IWB9 1127 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 RCBTB1Q8NDN9 531 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 MKL1Q969V6 931 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 C1orf159Q96HA4 380 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 TMEM169Q96HH4 297 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 PCDHA2Q9Y5H9 948 aa8.01□□□□□ -1.13
NCL-210ENST00000494618 BCL6P41182 706 aa8□□□□□ -1.13
NCL-210ENST00000494618 CDR1P51861 262 aa8□□□□□ -1.13
NCL-210ENST00000494618 MROH9Q5TGP6 573 aa8□□□□□ -1.13
NCL-210ENST00000494618 DENND5AQ6IQ26 1287 aa8□□□□□ -1.13
NCL-210ENST00000494618 DRC1Q96MC2 740 aa8□□□□□ -1.13
NCL-210ENST00000494618 DEPDC7Q96QD5 511 aa8□□□□□ -1.13
NCL-210ENST00000494618 SRPK1Q96SB4 655 aaKnown RBP8□□□□□ -1.13
NCL-210ENST00000494618 AP5M1Q9H0R1 490 aa8□□□□□ -1.13
NCL-210ENST00000494618 GPR27Q9NS67 375 aa8□□□□□ -1.13
NCL-210ENST00000494618 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
NCL-210ENST00000494618 PFDN2Q9UHV9 154 aa8□□□□□ -1.13
NCL-210ENST00000494618 COA3Q9Y2R0 106 aaPredicted RBP8□□□□□ -1.13
NCL-210ENST00000494618 NPFFR2Q9Y5X5 522 aa8□□□□□ -1.13
NCL-210ENST00000494618 ARNTLO00327 626 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 EPHB3P54753 998 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 RSPO2Q6UXX9 243 aaPredicted RBP7.99□□□□□ -1.13
NCL-210ENST00000494618 LRRC56Q8IYG6 542 aaPredicted RBP7.99□□□□□ -1.13
NCL-210ENST00000494618 DCAF4Q8WV16 495 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 ALG3Q92685 438 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 TSPAN17Q96FV3 270 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 CDC6Q99741 560 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 RXFP1Q9HBX9 757 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 KCTD3Q9Y597 815 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 PCDHA5Q9Y5H7 936 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 HCFC2Q9Y5Z7 792 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 IRS2Q9Y4H2 1338 aa7.99□□□□□ -1.13
NCL-210ENST00000494618 H7BY64 318 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 NUAK1O60285 661 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 BUB1BO60566 1050 aaPredicted RBP7.98□□□□□ -1.13
NCL-210ENST00000494618 NCAM1P13591 858 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 LCP1P13796 627 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 CFPP27918 469 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 JAG1P78504 1218 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 FZD5Q13467 585 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 RIOX2Q8IUF8 465 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
NCL-210ENST00000494618 RNF38Q9H0F5 515 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 SNTG2Q9NY99 539 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 X6R8D5 127 aa7.98□□□□□ -1.13
NCL-210ENST00000494618 FPR2P25090 351 aa7.97□□□□□ -1.13
NCL-210ENST00000494618 NCKAP1LP55160 1127 aa7.97□□□□□ -1.13
NCL-210ENST00000494618 RASA3Q14644 834 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms