RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 PLIN2Q99541 437 aa12.57□□□□□ -0.4
LDHA-211ENST00000494573 BLOC1S4Q9NUP1 217 aa12.57□□□□□ -0.4
LDHA-211ENST00000494573 TAB2Q9NYJ8 693 aa12.57□□□□□ -0.4
LDHA-211ENST00000494573 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
LDHA-211ENST00000494573 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
LDHA-211ENST00000494573 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
LDHA-211ENST00000494573 CCDC175P0C221 793 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 CHRNA5P30532 468 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 SLC16A2P36021 539 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 SLC1A4P43007 532 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 USP11P51784 963 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 CACNB3P54284 484 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 ICA1Q05084 483 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 TCP10Q12799 353 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 PSMD2Q13200 908 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 SEPT2Q15019 361 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 AOC3Q16853 763 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 KRT79Q5XKE5 535 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 ZSCAN29Q8IWY8 852 aaPredicted RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 RAD54LQ92698 747 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 VPS16Q9H269 839 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 DDX25Q9UHL0 483 aaKnown RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
LDHA-211ENST00000494573 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
LDHA-211ENST00000494573 CYP3A7-CYP3A51PA0A087WV96 503 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 CYP3A7P24462 503 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 CASP14P31944 242 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 MMP14P50281 582 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 DNM2P50570 870 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 PMS1P54277 932 aaKnown RBP12.55□□□□□ -0.4
LDHA-211ENST00000494573 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
LDHA-211ENST00000494573 BTNL9Q6UXG8 535 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 ZNF507Q8TCN5 953 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 IQCDQ96DY2 449 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 HERC5Q9UII4 1024 aaKnown RBP12.55□□□□□ -0.4
LDHA-211ENST00000494573 ABCB11O95342 1321 aa12.55□□□□□ -0.4
LDHA-211ENST00000494573 MYMKA6NI61 221 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 COBLO75128 1261 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 FGFR1OPO95684 399 aaKnown RBP12.54□□□□□ -0.4
LDHA-211ENST00000494573 CASQ1P31415 396 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 FXR1P51114 621 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDHA-211ENST00000494573 UBXN1Q04323 297 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 TRAF1Q13077 416 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 MCM6Q14566 821 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
LDHA-211ENST00000494573 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 CYP26C1Q6V0L0 522 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 RAD9BQ6WBX8 426 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 GUF1Q8N442 669 aaKnown RBP12.54□□□□□ -0.4
LDHA-211ENST00000494573 HAS1Q92839 578 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 PSMD1Q99460 953 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 CCDC94Q9BW85 323 aaPredicted RBP12.54□□□□□ -0.4
LDHA-211ENST00000494573 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 VPS33BQ9H267 617 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 ABHD10Q9NUJ1 306 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
LDHA-211ENST00000494573 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
LDHA-211ENST00000494573 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 POTEMA6NI47 508 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 F5H6K3 240 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 TBX3O15119 743 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 FOSP01100 380 aaPredicted RBP12.53□□□□□ -0.4
LDHA-211ENST00000494573 KLRC3Q07444 240 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 STK4Q13043 487 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 CENPPQ6IPU0 288 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
LDHA-211ENST00000494573 FBXO11Q86XK2 927 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 SLFN12Q8IYM2 578 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 CSGALNACT2Q8N6G5 542 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
LDHA-211ENST00000494573 CPLX3Q8WVH0 158 aa12.53□□□□□ -0.4
LDHA-211ENST00000494573 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
LDHA-211ENST00000494573 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms